Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 DNM1P32-201ENST00000566124 544 ntBASIC9.39□□□□□ -0.91
P04436 HMGN2P40-201ENST00000566875 391 ntBASIC9.39□□□□□ -0.91
P04436 AC090282.2-201ENST00000573526 931 ntBASIC9.39□□□□□ -0.91
P04436 AC134407.1-201ENST00000577385 709 ntTSL 3 BASIC9.39□□□□□ -0.91
P04436 MIR3190-201ENST00000577414 80 ntBASIC9.39□□□□□ -0.91
P04436 AC104564.4-201ENST00000579050 465 ntTSL 2 BASIC9.39□□□□□ -0.91
P04436 AP001029.2-201ENST00000586591 361 ntTSL 3 BASIC9.39□□□□□ -0.91
P04436 EMP3-206ENST00000597279 683 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
P04436 AC126283.1-201ENST00000609440 364 ntBASIC9.39□□□□□ -0.91
P04436 Metazoa_SRP.41-201ENST00000614637 258 ntBASIC9.39□□□□□ -0.91
P04436 AL355480.3-201ENST00000630128 96 ntBASIC9.39□□□□□ -0.91
P04436 OR2T32P-202ENST00000642003 1114 ntBASIC9.39□□□□□ -0.91
P04436 GALK2-202ENST00000396509 1834 ntTSL 2 BASIC9.39□□□□□ -0.91
P04436 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04436 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04436 KCTD21-AS1-201ENST00000500113 1789 ntTSL 2 BASIC9.39□□□□□ -0.91
P04436 MAP6-204ENST00000526740 1755 ntTSL 5 BASIC9.39□□□□□ -0.91
P04436 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04436 MIR4435-2HG-202ENST00000371162 2044 ntBASIC9.39□□□□□ -0.91
P04436 AC068790.9-201ENST00000621669 2838 ntBASIC9.39□□□□□ -0.91
P04436 COPS4-202ENST00000503682 1702 ntTSL 5 BASIC9.39□□□□□ -0.91
P04436 GLT1D1-205ENST00000537468 1714 ntTSL 2 BASIC9.39□□□□□ -0.91
P04436 PROM2-202ENST00000317668 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04436 AC145285.2-201ENST00000507031 1963 ntTSL 2 BASIC9.39□□□□□ -0.91
P04436 BIN2-202ENST00000544402 1990 ntTSL 2 BASIC9.39□□□□□ -0.91
P04436 GABRA1-204ENST00000437025 4087 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04436 MOG-218ENST00000376894 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04436 AP004290.1-201ENST00000440915 1412 ntBASIC9.39□□□□□ -0.91
P04436 NDUFB4-203ENST00000485064 1426 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04436 BMF-202ENST00000397573 4545 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04436 PRPSAP1-201ENST00000324684 1678 ntTSL 2 BASIC9.39□□□□□ -0.91
P04436 CCDC172-201ENST00000333254 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04436 RBPJ-208ENST00000504907 1682 ntTSL 5 BASIC9.39□□□□□ -0.91
P04436 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC9.39□□□□□ -0.91
P04436 CD36-222ENST00000538969 1922 ntTSL 5 BASIC9.39□□□□□ -0.91
P04436 CD36-223ENST00000544133 1914 ntTSL 5 BASIC9.39□□□□□ -0.91
P04436 OSBPL6-204ENST00000359685 7114 ntTSL 5 BASIC9.38□□□□□ -0.91
P04436 CCNB1IP1-203ENST00000398160 1613 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
P04436 SLAMF7-205ENST00000444090 2393 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
P04436 ZNF550-206ENST00000506609 1361 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
P04436 FAM238C-203ENST00000640121 3620 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
P04436 STEAP4-203ENST00000414498 2332 ntTSL 2 BASIC9.38□□□□□ -0.91
P04436 MIR3142HG-201ENST00000517927 2301 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 NREP-205ENST00000446294 2065 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
P04436 MID1-211ENST00000610939 1839 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 CCDC40-203ENST00000374877 3544 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
P04436 PAXBP1-AS1-201ENST00000440052 3523 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 INPP5B-206ENST00000458109 3979 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 LRIF1-201ENST00000369763 3475 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
P04436 TPM3-207ENST00000341372 2007 ntTSL 5 BASIC9.38□□□□□ -0.91
P04436 RPL23-201ENST00000245857 588 ntTSL 3 BASIC9.38□□□□□ -0.91
P04436 SAA2-201ENST00000256733 563 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 LIN37-201ENST00000301159 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 AL358473.2-202ENST00000415359 508 ntTSL 5 BASIC9.38□□□□□ -0.91
P04436 AC079305.2-201ENST00000416154 561 ntBASIC9.38□□□□□ -0.91
P04436 AL136528.2-201ENST00000416554 351 ntTSL 2 BASIC9.38□□□□□ -0.91
P04436 AL033527.2-201ENST00000418255 785 ntTSL 2 BASIC9.38□□□□□ -0.91
P04436 AC141930.2-201ENST00000419028 555 ntTSL 4 BASIC9.38□□□□□ -0.91
P04436 AC007253.1-201ENST00000425555 889 ntBASIC9.38□□□□□ -0.91
P04436 AC118555.1-201ENST00000426386 696 ntTSL 3 BASIC9.38□□□□□ -0.91
P04436 AL445490.1-201ENST00000430683 489 ntTSL 3 BASIC9.38□□□□□ -0.91
P04436 HMGN1P38-201ENST00000431116 303 ntBASIC9.38□□□□□ -0.91
P04436 AL161937.2-202ENST00000435301 733 ntTSL 3 BASIC9.38□□□□□ -0.91
P04436 ULBP3-202ENST00000438272 735 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 AC073321.1-201ENST00000441803 654 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 AL441964.1-201ENST00000454528 658 ntBASIC9.38□□□□□ -0.91
P04436 SNRPCP10-201ENST00000481033 210 ntBASIC9.38□□□□□ -0.91
P04436 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC9.38□□□□□ -0.91
P04436 AP003031.2-201ENST00000533945 573 ntTSL 4 BASIC9.38□□□□□ -0.91
P04436 NEDD8-MDP1-202ENST00000534348 595 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
P04436 IFITM9P-201ENST00000535743 396 ntBASIC9.38□□□□□ -0.91
P04436 AF038458.2-201ENST00000587412 600 ntTSL 3 BASIC9.38□□□□□ -0.91
P04436 AC005580.1-203ENST00000591926 503 ntTSL 4 BASIC9.38□□□□□ -0.91
P04436 GAGE1-203ENST00000610680 564 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 AL662791.5-202ENST00000623946 461 ntTSL 2 BASIC9.38□□□□□ -0.91
P04436 AC096920.2-201ENST00000624711 339 ntTSL 4 BASIC9.38□□□□□ -0.91
P04436 AC010729.1-201ENST00000413960 1746 ntTSL 3 BASIC9.38□□□□□ -0.91
P04436 AC068299.1-201ENST00000624716 1749 ntBASIC9.38□□□□□ -0.91
P04436 PLXNA4-204ENST00000423507 3314 ntTSL 2 BASIC9.38□□□□□ -0.91
P04436 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 EIF3CL-202ENST00000398944 3053 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
P04436 UBE2V1-206ENST00000415862 2387 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 PADI3-201ENST00000375460 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 GABPA-201ENST00000354828 5120 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 ICE2-213ENST00000561114 3796 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 OPTN-206ENST00000378764 2498 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
P04436 TFAP2A-203ENST00000379613 3317 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 FKBP9-212ENST00000490776 2699 ntTSL 2 BASIC9.38□□□□□ -0.91
P04436 MRPL10-201ENST00000290208 2013 ntTSL 2 BASIC9.38□□□□□ -0.91
P04436 TDRD1-203ENST00000369282 3705 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
P04436 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P04436 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC9.37□□□□□ -0.91
P04436 COL10A1-202ENST00000327673 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 GTF3C2-201ENST00000264720 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 C16orf62-203ENST00000438132 3855 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 ARHGAP40-202ENST00000373345 2841 ntAPPRIS P5 TSL 5 BASIC9.37□□□□□ -0.91
P04436 BORA-206ENST00000613797 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 595 ms