Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 EPB41L2-216ENST00000527411 4186 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 BBS9-201ENST00000242067 4027 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 AP3B2-201ENST00000261722 3736 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 LASP1-201ENST00000318008 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 CCL21-201ENST00000259607 852 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 RPL29-201ENST00000294189 723 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 TP53TG3C-201ENST00000360260 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 SALL4-202ENST00000371539 1151 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 PRPS1-201ENST00000372418 942 ntTSL 3 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 FABP6-201ENST00000393980 756 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 ZNF847P-201ENST00000412638 1077 ntBASIC10.87□□□□□ -0.67
LMO3Q8TAP4 GTF3C2-AS1-201ENST00000416453 863 ntTSL 2 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 Z99716.1-201ENST00000424613 515 ntTSL 5 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 AC062020.1-201ENST00000435441 801 ntTSL 3 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 ATP5J2LP-201ENST00000444161 235 ntBASIC10.87□□□□□ -0.67
LMO3Q8TAP4 AL441964.1-201ENST00000454528 658 ntBASIC10.87□□□□□ -0.67
LMO3Q8TAP4 STXBP5L-204ENST00000471454 3813 ntAPPRIS ALT1 TSL 2 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 RN7SL125P-201ENST00000480790 294 ntBASIC10.87□□□□□ -0.67
LMO3Q8TAP4 AP002784.1-201ENST00000506309 546 ntTSL 4 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 AC112206.2-202ENST00000514368 756 ntTSL 3 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 CHORDC1-207ENST00000530765 564 ntTSL 4 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 LINC02251-201ENST00000554798 1224 ntTSL 5 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 LINC00524-201ENST00000556987 418 ntTSL 3 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 AC096996.2-201ENST00000563906 426 ntTSL 3 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 TP53TG3-208ENST00000569420 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 TP53TG3B-205ENST00000569741 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 AC010487.2-201ENST00000594546 486 ntTSL 2 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 ZNF429-206ENST00000597078 1043 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 BNIP3P34-201ENST00000600724 572 ntBASIC10.87□□□□□ -0.67
LMO3Q8TAP4 TP53TG3E-201ENST00000611321 1181 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 LINC01943-202ENST00000628090 926 ntTSL 5 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 AL445250.1-205ENST00000641631 1094 ntBASIC10.87□□□□□ -0.67
LMO3Q8TAP4 KIAA0907-202ENST00000368320 4499 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 ZNF221-204ENST00000592350 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 DNAH7-203ENST00000410072 1937 ntTSL 2 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 POTEA-202ENST00000522175 1931 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 C1QTNF7-205ENST00000444304 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 FHL1-229ENST00000629039 1501 ntTSL 2 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 LMX1A-201ENST00000294816 3350 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 TRO-204ENST00000375041 3488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 NELL1-211ENST00000532434 2400 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 CAPRIN1-201ENST00000341394 4108 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 LRRC74A-202ENST00000393774 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 GALNT15-201ENST00000339732 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 INPP5B-206ENST00000458109 3979 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 MSRB3-201ENST00000308259 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 SIDT2-202ENST00000324225 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 ZNF418-201ENST00000396147 3694 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 TUBB-205ENST00000327892 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 RGPD5-201ENST00000016946 7253 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 CD36-202ENST00000394788 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 SEC24C-201ENST00000339365 4513 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 FAM114A1-206ENST00000515037 1431 ntTSL 2 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 OASL-201ENST00000257570 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 CACNA2D4-202ENST00000382722 5475 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 TPM3-207ENST00000341372 2007 ntTSL 5 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 POC5-211ENST00000510798 1524 ntTSL 2 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 PPP1R32-202ENST00000366212 488 ntTSL 2 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 ZNF669-203ENST00000366501 730 ntTSL 3 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 SLAMF8-202ENST00000368104 1038 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 CA5BP1-204ENST00000380336 843 ntTSL 5 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 SNRPD2-202ENST00000391932 615 ntTSL 2 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 AL355864.1-201ENST00000401937 526 ntBASIC10.86□□□□□ -0.67
LMO3Q8TAP4 RN7SKP8-201ENST00000411037 358 ntBASIC10.86□□□□□ -0.67
LMO3Q8TAP4 AL445490.1-201ENST00000430683 489 ntTSL 3 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 AC078842.1-201ENST00000438969 553 ntTSL 4 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 SSR3-205ENST00000467789 1039 ntTSL 2 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 RPL12P35-201ENST00000477007 496 ntBASIC10.86□□□□□ -0.67
LMO3Q8TAP4 SNRPCP10-201ENST00000481033 210 ntBASIC10.86□□□□□ -0.67
LMO3Q8TAP4 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 FBXL2-216ENST00000484457 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 FBXL2-221ENST00000507198 1259 ntTSL 2 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 RNA5SP414-201ENST00000516580 136 ntBASIC10.86□□□□□ -0.67
LMO3Q8TAP4 SMURF2P1-202ENST00000579301 570 ntTSL 5 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 MIR3194-201ENST00000582236 73 ntBASIC10.86□□□□□ -0.67
LMO3Q8TAP4 AC010636.2-201ENST00000595094 522 ntTSL 5 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 AL359091.3-201ENST00000609315 573 ntBASIC10.86□□□□□ -0.67
LMO3Q8TAP4 Metazoa_SRP.41-201ENST00000614637 258 ntBASIC10.86□□□□□ -0.67
LMO3Q8TAP4 TIAM1-207ENST00000636887 4160 ntTSL 5 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 TRPV3-211ENST00000616411 5742 ntTSL 5 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 XRCC6-205ENST00000405878 2200 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 TWNK-202ENST00000370228 3175 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 ABCC8-202ENST00000389817 4921 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 TACC1-204ENST00000518415 3011 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 MLH1-201ENST00000231790 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 ZNF816-206ENST00000444460 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 SLC9B2-203ENST00000503103 1911 ntTSL 2 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 AC008534.1-201ENST00000513849 1940 ntTSL 5 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 RRP12-211ENST00000536831 4476 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
LMO3Q8TAP4 BRD7-201ENST00000394688 5370 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 ZEB2-224ENST00000539609 4061 ntTSL 2 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 ABT1-201ENST00000274849 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms