Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC010203.1-201ENST00000548404 928 ntTSL 3 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 AL133167.1-201ENST00000554889 806 ntTSL 2 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 TGIF2LY-202ENST00000559055 927 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 EHD4-AS1-201ENST00000564168 771 ntTSL 3 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 AC011473.3-201ENST00000594910 485 ntTSL 5 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 AC008972.1-201ENST00000607027 640 ntBASIC10.89□□□□□ -0.67
LMO3Q8TAP4 AL133227.1-201ENST00000612368 594 ntTSL 4 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 Metazoa_SRP.149-201ENST00000613165 297 ntBASIC10.89□□□□□ -0.67
LMO3Q8TAP4 AP002383.6-201ENST00000616726 697 ntBASIC10.89□□□□□ -0.67
LMO3Q8TAP4 AC013553.4-201ENST00000619781 622 ntBASIC10.89□□□□□ -0.67
LMO3Q8TAP4 AC027369.1-201ENST00000640698 1105 ntTSL 5 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 SLC12A3-205ENST00000566786 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 SERPINA9-201ENST00000298845 1423 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 OLFML1-203ENST00000528758 1438 ntTSL 2 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 RPS10-NUDT3-203ENST00000639877 2911 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 TMEM33-202ENST00000325094 6221 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 RPL32P3-205ENST00000507287 1555 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 GABRP-206ENST00000519385 1567 ntTSL 2 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 FHOD3-202ENST00000359247 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 TCF4-254ENST00000626584 1701 ntTSL 5 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 IL17A-201ENST00000340057 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 CD207-201ENST00000410009 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 GOLGA6A-201ENST00000290438 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 EARS2-207ENST00000563459 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 FPGT-201ENST00000370894 1380 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 MRPL47-203ENST00000476781 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 LPIN3-205ENST00000632009 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 CASC19-229ENST00000641418 1373 ntBASIC10.89□□□□□ -0.67
LMO3Q8TAP4 PLAGL1-203ENST00000367571 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 SLC4A1AP-201ENST00000326019 2959 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 ICA1-209ENST00000422063 1539 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 CYP17A1-204ENST00000638190 1506 ntTSL 5 BASIC10.89□□□□□ -0.67
LMO3Q8TAP4 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 LACC1-203ENST00000441843 4262 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 POP1-202ENST00000401707 4719 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 SPO11-202ENST00000371260 1608 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 AP001425.1-201ENST00000632732 1940 ntBASIC10.88□□□□□ -0.67
LMO3Q8TAP4 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 AL157712.1-201ENST00000620178 2055 ntBASIC10.88□□□□□ -0.67
LMO3Q8TAP4 RCAN3-208ENST00000610732 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 FAM86EP-201ENST00000313946 2845 ntTSL 2 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 MCM5-201ENST00000216122 3534 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 MOV10-201ENST00000357443 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 PARP1-201ENST00000366790 570 ntTSL 2 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 RBMY2WP-201ENST00000424230 894 ntBASIC10.88□□□□□ -0.67
LMO3Q8TAP4 ANKRD44-IT1-201ENST00000428191 1069 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 MIR205HG-204ENST00000431096 908 ntTSL 3 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 TSEN15P2-201ENST00000442453 358 ntBASIC10.88□□□□□ -0.67
LMO3Q8TAP4 KIAA1456-202ENST00000447063 983 ntTSL 2 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 RBMY2XP-201ENST00000447471 895 ntBASIC10.88□□□□□ -0.67
LMO3Q8TAP4 TUBBP2-201ENST00000454403 411 ntBASIC10.88□□□□□ -0.67
LMO3Q8TAP4 LINC02004-201ENST00000482019 294 ntTSL 2 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 AC104117.3-201ENST00000519491 674 ntTSL 3 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 UBE2V2-204ENST00000520809 2450 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 ZSCAN9-208ENST00000531981 854 ntTSL 4 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 CLSTN3-207ENST00000537408 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 GLI1-207ENST00000543426 3394 ntTSL 5 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 SLC11A2-209ENST00000547198 2486 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 PSMA6-211ENST00000555764 1002 ntTSL 2 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 AP000223.1-201ENST00000567517 557 ntBASIC10.88□□□□□ -0.67
LMO3Q8TAP4 AC002551.1-201ENST00000569881 592 ntTSL 3 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 AC005394.1-201ENST00000589999 1269 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 LYPD8-202ENST00000590317 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 ZNF268-218ENST00000592241 686 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 AC063977.4-201ENST00000595913 872 ntBASIC10.88□□□□□ -0.67
LMO3Q8TAP4 AC079230.1-201ENST00000602428 1143 ntBASIC10.88□□□□□ -0.67
LMO3Q8TAP4 HIST1H2BJ-203ENST00000607124 950 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 SAMD4B-214ENST00000611159 3662 ntTSL 5 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 FOXCUT-201ENST00000628509 333 ntTSL 3 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 AC005906.2-209ENST00000639919 1244 ntTSL 5 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 AC241952.1-201ENST00000612480 6897 ntBASIC10.88□□□□□ -0.67
LMO3Q8TAP4 PCK1-201ENST00000319441 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 WASHC2A-204ENST00000399339 4323 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 BX005214.3-201ENST00000615174 1988 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 AL353770.3-201ENST00000616253 1988 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 UNC45B-202ENST00000394570 5638 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 CES5A-208ENST00000541580 1669 ntTSL 5 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 LINC00930-202ENST00000557075 1541 ntTSL 2 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 ITGAL-202ENST00000358164 4673 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 MAGEA10-202ENST00000370323 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LMO3Q8TAP4 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 CABYR-218ENST00000627314 1622 ntTSL 2 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 MBTPS2-202ENST00000379484 4428 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 SERPINA10-203ENST00000554173 2000 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 TMC3-AS1-207ENST00000642113 2043 ntBASIC10.87□□□□□ -0.67
LMO3Q8TAP4 TUBBP6-201ENST00000416519 1332 ntBASIC10.87□□□□□ -0.67
LMO3Q8TAP4 ABI1-201ENST00000346832 3289 ntTSL 2 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 CSMD2-204ENST00000373380 4379 ntTSL 2 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 WDR6-220ENST00000608424 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 GNL3L-202ENST00000360845 2135 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LMO3Q8TAP4 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms