Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 ZNF106-203ENST00000565380 5677 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 CENPO-201ENST00000260662 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AP3B2-203ENST00000535359 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 ADAM1A-201ENST00000424240 2129 ntBASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 SYNE1-237ENST00000539504 3768 ntTSL 5 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 NRAP-202ENST00000360478 5426 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 TRIM26-268ENST00000454678 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 VNN3-204ENST00000414302 1312 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 VPS8-227ENST00000625842 4969 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AACSP1-201ENST00000503486 2822 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 LIN54-203ENST00000446851 4083 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 PAX3-204ENST00000350526 3610 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 PALB2-206ENST00000568219 3963 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 LINC02145-202ENST00000507444 2419 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AC034229.3-201ENST00000606203 2436 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 ARHGAP17-201ENST00000289968 3461 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 ZNF222-201ENST00000187879 1598 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 WTAP-202ENST00000358372 3656 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 CDH4-202ENST00000611855 3304 ntTSL 5 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 DEF8-227ENST00000570182 3549 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 SLC13A5-201ENST00000293800 3176 ntTSL 2 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 FNIP2-201ENST00000264433 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 DDX55P1-201ENST00000603334 1414 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 SDAD1P4-201ENST00000418445 1645 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 CEPT1-201ENST00000357172 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AC020978.10-201ENST00000623181 2704 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 RPL23-201ENST00000245857 588 ntTSL 3 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 RNASE3-201ENST00000304639 720 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 NOVA1-201ENST00000344429 896 ntTSL 2 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 Metazoa_SRP.3-201ENST00000366116 282 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AL355864.1-201ENST00000401937 526 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 LINC01238-201ENST00000416204 590 ntTSL 2 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 LINC02068-202ENST00000424941 563 ntTSL 2 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AL357060.2-201ENST00000440578 1025 ntTSL 3 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AL441964.1-201ENST00000454528 658 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AC005105.1-201ENST00000454851 792 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 ANP32C-201ENST00000512835 705 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 LINC02219-201ENST00000520762 454 ntTSL 2 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 LYNX1-207ENST00000523332 600 ntTSL 3 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 TAGLN2P1-201ENST00000524097 587 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AP001767.1-201ENST00000530976 286 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 NDUFA12-204ENST00000547157 276 ntTSL 2 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AL132639.1-201ENST00000553698 475 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AC002094.3-201ENST00000555059 851 ntAPPRIS P1 TSL 4 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AL356740.3-201ENST00000598534 649 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 C1orf61-227ENST00000615748 768 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 HTT-AS1_2.1-201ENST00000621529 175 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AC239585.2-201ENST00000624269 557 ntTSL 4 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AL157931.2-201ENST00000635091 463 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AC004584.3-201ENST00000572877 2356 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 PKP2-201ENST00000070846 4241 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 HLA-V-203ENST00000457107 4814 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 CCDC144NL-AS1-207ENST00000577537 3727 ntTSL 2 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 LINC01588-204ENST00000530176 2444 ntTSL 2 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 CARD14-201ENST00000344227 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 AL512590.2-201ENST00000531758 1341 ntBASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 MPP4-205ENST00000409474 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 GPR55-201ENST00000392039 1523 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 PEX12-204ENST00000613219 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 SLC22A8-203ENST00000430500 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 FPR1-201ENST00000304748 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 OGFOD1-207ENST00000566157 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 ANKRD62-202ENST00000587848 2919 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 RAB39B-201ENST00000369454 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYCE2Q6PIF2 PAPD4-207ENST00000504233 2997 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SYCE2Q6PIF2 RPS6KA5-202ENST00000536315 2993 ntTSL 2 BASIC10.77□□□□□ -0.68
SYCE2Q6PIF2 CSE1L-201ENST00000262982 3553 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SYCE2Q6PIF2 DHX8-201ENST00000262415 5558 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SYCE2Q6PIF2 ZNF100-206ENST00000608416 1840 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
SYCE2Q6PIF2 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SYCE2Q6PIF2 AGAP11-201ENST00000433214 3078 ntTSL 2 BASIC10.77□□□□□ -0.68
SYCE2Q6PIF2 TPK1-203ENST00000378099 2283 ntTSL 3 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 PCDHGA4-201ENST00000571252 4778 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 STAT3-211ENST00000585517 3319 ntTSL 5 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 MUC21-202ENST00000486149 2527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AC009779.3-202ENST00000550412 3382 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 RNASE1-201ENST00000340900 878 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 IFIT6P-201ENST00000418257 1194 ntBASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 VNN3-206ENST00000423615 1021 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AL355877.1-201ENST00000428812 2108 ntBASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AL049812.2-201ENST00000431589 594 ntTSL 2 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AC005006.1-201ENST00000432130 249 ntTSL 3 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AC245036.2-201ENST00000433549 287 ntBASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AC073046.1-201ENST00000441217 390 ntTSL 3 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AL583808.1-201ENST00000445976 499 ntTSL 3 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AC130689.1-201ENST00000451056 408 ntBASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AL135902.1-201ENST00000458017 384 ntTSL 5 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 RPL34P18-201ENST00000466433 354 ntBASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AC084398.1-201ENST00000494902 459 ntBASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AK4P2-201ENST00000504372 670 ntBASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms