Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KY-205ENST00000508956 2422 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 IL4R-203ENST00000543915 3539 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 TRIM51BP-201ENST00000525732 1359 ntBASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 KCNE1-209ENST00000621601 3148 ntAPPRIS P1 TSL 4 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 PAXIP1-201ENST00000397192 3711 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 ADAM21P1-202ENST00000530196 2049 ntBASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 PDGFD-202ENST00000393158 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 PNLIPRP1-221ENST00000534537 1459 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 TCF4-232ENST00000566286 2119 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 PARD3B-203ENST00000358768 3432 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 IST1-202ENST00000378798 2255 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 HADHAP2-201ENST00000540341 2285 ntBASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 PRICKLE1-205ENST00000548696 3635 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 PLAG1-202ENST00000423799 1684 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 MICALCL-201ENST00000256186 3044 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 MAB21L1-201ENST00000379919 3028 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 GEMIN4-201ENST00000319004 3748 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 SLCO2B1-201ENST00000289575 4494 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AC078925.4-201ENST00000623737 1717 ntBASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 ST3GAL5-257ENST00000640418 2467 ntTSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 DDX3X-215ENST00000625837 3237 ntTSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 ESR1-202ENST00000338799 3335 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 PROX2-201ENST00000556084 3359 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 EIF4G1-221ENST00000441154 4311 ntTSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AL590132.1-201ENST00000639602 4455 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 ING3-202ENST00000339121 1222 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 CBFA2T2-202ENST00000344201 1181 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 DEDD-201ENST00000368005 1256 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 MAGT1-202ENST00000373336 962 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 CYCSP55-201ENST00000399027 311 ntBASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AL662800.1-201ENST00000415195 851 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AL158207.1-201ENST00000417984 341 ntBASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 LINC01779-201ENST00000426515 914 ntTSL 3 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AC098828.3-201ENST00000430429 746 ntTSL 3 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AL136376.1-201ENST00000449303 515 ntTSL 3 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 PHBP13-201ENST00000453244 760 ntBASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AC108448.1-201ENST00000455154 293 ntTSL 3 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 RPS3P6-201ENST00000487417 605 ntBASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AC103724.1-201ENST00000490411 519 ntBASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 PFDN1-203ENST00000510217 1091 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 PDLIM5-217ENST00000512274 372 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AC104561.1-201ENST00000521021 630 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 RPL27A-204ENST00000526562 519 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AC007552.2-201ENST00000541892 603 ntTSL 4 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 PRELID1P4-201ENST00000561466 512 ntBASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AC005277.1-201ENST00000582915 335 ntTSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AC079210.1-201ENST00000589826 384 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 DMAC2-209ENST00000590641 1026 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AC010636.2-201ENST00000595094 522 ntTSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AP000919.4-201ENST00000608032 720 ntBASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 SVIL-AS1-211ENST00000609413 566 ntTSL 4 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AC009158.1-202ENST00000609586 242 ntTSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 PCBP1-AS1-320ENST00000627918 1146 ntTSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 KLF7-203ENST00000421199 3037 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AC034199.1-201ENST00000511921 2182 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 KNOP1P2-201ENST00000605379 1317 ntBASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 PKD2L2-201ENST00000290431 2202 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 AC091167.8-201ENST00000641199 3441 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 GIMD1-202ENST00000638719 1470 ntTSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 LCMT1-AS2-201ENST00000562280 2601 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 HAP1-202ENST00000341193 3880 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 CU633980.1-201ENST00000613894 1708 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 PCBP2-203ENST00000437231 3026 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 C9orf153-201ENST00000339137 1845 ntAPPRIS P2 TSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 LINC02453-201ENST00000501499 1825 ntTSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 ADORA3-201ENST00000241356 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 SLC16A14-201ENST00000295190 4398 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 MED22-208ENST00000610672 4367 ntAPPRIS P4 TSL 2 BASIC9.45□□□□□ -0.9
NPIPA3F8WFD2 TATDN2-203ENST00000448281 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 TMPRSS11E-201ENST00000305363 2136 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 CCDC173-203ENST00000447353 2181 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ZMAT4-202ENST00000315769 2250 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 TNIK-214ENST00000488470 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 LPIN3-205ENST00000632009 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ATP12A-202ENST00000381946 4258 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ZNF83-211ENST00000597597 4442 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ADAMTSL1-201ENST00000276935 2906 ntTSL 5 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 LINC01483-201ENST00000433856 3085 ntTSL 2 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 PSME3-205ENST00000545225 3082 ntTSL 2 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ZFP36L1-204ENST00000555997 3094 ntTSL 3 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 VPS11-208ENST00000621676 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 NDST2-201ENST00000299641 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 NLRP12-202ENST00000345770 3547 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 NRF1-203ENST00000353868 3568 ntTSL 5 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 IPO4-201ENST00000354464 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AC008013.1-204ENST00000222396 623 ntTSL 4 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 CDCA3-201ENST00000229265 1047 ntTSL 2 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 RRP36-201ENST00000244496 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 OR2T29-201ENST00000328570 1014 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 805.9 ms