Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 AL031258.1-201ENST00000623562 325 ntBASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPCS1Q9Y6A9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 AL359504.2-201ENST00000605506 1601 ntBASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPCS1Q9Y6A9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 AL133373.2-201ENST00000623187 2828 ntBASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPCS1Q9Y6A9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 OR6D1P-202ENST00000641007 5290 ntBASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 AL049812.1-201ENST00000432563 2267 ntBASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS1Q9Y6A9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SPCS1Q9Y6A9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.35□□□□□ -0.11
SPCS1Q9Y6A9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.35□□□□□ -0.11
SPCS1Q9Y6A9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.35□□□□□ -0.11
SPCS1Q9Y6A9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SPCS1Q9Y6A9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms