Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCN10AQ9Y5Y9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.12■■□□□ 1.29
SCN10AQ9Y5Y9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SCN10AQ9Y5Y9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCN10AQ9Y5Y9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCN10AQ9Y5Y9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SCN10AQ9Y5Y9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SCN10AQ9Y5Y9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
SCN10AQ9Y5Y9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCN10AQ9Y5Y9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.11■■□□□ 1.29
SCN10AQ9Y5Y9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SCN10AQ9Y5Y9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.11■■□□□ 1.29
SCN10AQ9Y5Y9 AL359736.2-201ENST00000621992 437 ntBASIC23.11■■□□□ 1.29
SCN10AQ9Y5Y9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.11■■□□□ 1.29
SCN10AQ9Y5Y9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
SCN10AQ9Y5Y9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.11■■□□□ 1.29
SCN10AQ9Y5Y9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 HLA-B-256ENST00000639848 1089 ntBASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 AC008550.1-201ENST00000511500 884 ntBASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.1■■□□□ 1.29
SCN10AQ9Y5Y9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 AC069544.1-201ENST00000609399 999 ntBASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 AL589743.5-201ENST00000616611 1050 ntBASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SCN10AQ9Y5Y9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
SCN10AQ9Y5Y9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.08■■□□□ 1.28
SCN10AQ9Y5Y9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SCN10AQ9Y5Y9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 AC105020.6-201ENST00000621523 1217 ntBASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.07■■□□□ 1.28
SCN10AQ9Y5Y9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.06■■□□□ 1.28
SCN10AQ9Y5Y9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SCN10AQ9Y5Y9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.06■■□□□ 1.28
SCN10AQ9Y5Y9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.06■■□□□ 1.28
SCN10AQ9Y5Y9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SCN10AQ9Y5Y9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SCN10AQ9Y5Y9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SCN10AQ9Y5Y9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.06■■□□□ 1.28
SCN10AQ9Y5Y9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SCN10AQ9Y5Y9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SCN10AQ9Y5Y9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms