Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDHA9Q9Y5H5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 MIR6084-201ENST00000622012 110 ntBASIC20.08■□□□□ 0.81
PCDHA9Q9Y5H5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA9Q9Y5H5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA9Q9Y5H5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA9Q9Y5H5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDHA9Q9Y5H5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA9Q9Y5H5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 TPRG1LP1-201ENST00000598702 760 ntBASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHA9Q9Y5H5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
PCDHA9Q9Y5H5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA9Q9Y5H5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PCDHA9Q9Y5H5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA9Q9Y5H5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA9Q9Y5H5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.06■□□□□ 0.8
PCDHA9Q9Y5H5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PCDHA9Q9Y5H5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHA9Q9Y5H5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHA9Q9Y5H5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHA9Q9Y5H5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 GABARAPL3-202ENST00000624044 1851 ntBASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHA9Q9Y5H5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms