Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 AC027612.3-201ENST00000413684 1047 ntBASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 AC123595.1-201ENST00000440769 1046 ntBASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 DUX4L2-201ENST00000561772 1275 ntBASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 DUX4L6-201ENST00000626483 1275 ntBASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 DUX4L1-201ENST00000627662 1275 ntBASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 DUX4L8-201ENST00000629013 1275 ntBASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 DUX4L3-201ENST00000630187 1275 ntBASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 DUX4L7-201ENST00000630678 1275 ntBASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 DUX4L5-201ENST00000630834 1275 ntBASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.69■□□□□ 0.26
LSM4Q9Y4Z0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 SLC47A1P1-202ENST00000449666 945 ntBASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
LSM4Q9Y4Z0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 AC003102.1-202ENST00000563394 1796 ntBASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 OR2I1P-207ENST00000453522 948 ntBASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 AL034346.1-201ENST00000568244 1277 ntBASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 AC087239.1-201ENST00000622671 572 ntBASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LSM4Q9Y4Z0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 MIR572-201ENST00000384983 95 ntBASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 AC010141.3-201ENST00000456659 717 ntBASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 IGHV3-19-201ENST00000521488 291 ntBASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 AC092437.1-201ENST00000624794 1048 ntBASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LSM4Q9Y4Z0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms