Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
LSM2Q9Y333 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM2Q9Y333 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM2Q9Y333 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM2Q9Y333 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM2Q9Y333 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LSM2Q9Y333 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.58■□□□□ 0.56
LSM2Q9Y333 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.58■□□□□ 0.56
LSM2Q9Y333 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.58■□□□□ 0.56
LSM2Q9Y333 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
LSM2Q9Y333 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM2Q9Y333 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LSM2Q9Y333 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM2Q9Y333 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.58■□□□□ 0.56
LSM2Q9Y333 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM2Q9Y333 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LSM2Q9Y333 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.58■□□□□ 0.56
LSM2Q9Y333 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM2Q9Y333 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM2Q9Y333 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM2Q9Y333 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM2Q9Y333 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM2Q9Y333 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LSM2Q9Y333 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSM2Q9Y333 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LSM2Q9Y333 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSM2Q9Y333 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LSM2Q9Y333 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM2Q9Y333 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LSM2Q9Y333 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM2Q9Y333 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM2Q9Y333 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM2Q9Y333 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM2Q9Y333 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM2Q9Y333 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LSM2Q9Y333 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSM2Q9Y333 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LSM2Q9Y333 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM2Q9Y333 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LSM2Q9Y333 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM2Q9Y333 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LSM2Q9Y333 AC010525.1-201ENST00000585559 441 ntBASIC18.56■□□□□ 0.56
LSM2Q9Y333 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM2Q9Y333 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LSM2Q9Y333 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSM2Q9Y333 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LSM2Q9Y333 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LSM2Q9Y333 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM2Q9Y333 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSM2Q9Y333 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM2Q9Y333 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM2Q9Y333 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM2Q9Y333 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSM2Q9Y333 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.55■□□□□ 0.56
LSM2Q9Y333 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSM2Q9Y333 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM2Q9Y333 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.55■□□□□ 0.56
LSM2Q9Y333 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSM2Q9Y333 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LSM2Q9Y333 AL033527.3-201ENST00000566366 1196 ntBASIC18.55■□□□□ 0.56
LSM2Q9Y333 MIR3181-201ENST00000578512 73 ntBASIC18.55■□□□□ 0.56
LSM2Q9Y333 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
LSM2Q9Y333 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
LSM2Q9Y333 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM2Q9Y333 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM2Q9Y333 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LSM2Q9Y333 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LSM2Q9Y333 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSM2Q9Y333 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM2Q9Y333 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSM2Q9Y333 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM2Q9Y333 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM2Q9Y333 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM2Q9Y333 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LSM2Q9Y333 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM2Q9Y333 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.54■□□□□ 0.56
LSM2Q9Y333 KRT125P-201ENST00000546827 989 ntBASIC18.54■□□□□ 0.56
LSM2Q9Y333 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LSM2Q9Y333 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSM2Q9Y333 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSM2Q9Y333 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM2Q9Y333 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSM2Q9Y333 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
LSM2Q9Y333 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
LSM2Q9Y333 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
LSM2Q9Y333 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.53■□□□□ 0.56
LSM2Q9Y333 AC012354.3-201ENST00000623734 483 ntBASIC18.53■□□□□ 0.56
LSM2Q9Y333 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM2Q9Y333 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.53■□□□□ 0.56
LSM2Q9Y333 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms