Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPH3AQ9Y2J0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPH3AQ9Y2J0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPH3AQ9Y2J0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 ABHD17AP1-201ENST00000358206 933 ntBASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 SLC7A5P2-201ENST00000553010 536 ntBASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 AC008175.2-201ENST00000612840 297 ntBASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RPH3AQ9Y2J0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 AC244015.2-201ENST00000616358 1861 ntBASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPH3AQ9Y2J0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 KRT18P11-201ENST00000435214 1283 ntBASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 BID-214ENST00000617586 542 ntTSL 5 BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 AC061975.6-201ENST00000579045 1553 ntBASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPH3AQ9Y2J0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPH3AQ9Y2J0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RPH3AQ9Y2J0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPH3AQ9Y2J0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.08■□□□□ 0.65
RPH3AQ9Y2J0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RPH3AQ9Y2J0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.08■□□□□ 0.65
RPH3AQ9Y2J0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPH3AQ9Y2J0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 AC011767.1-201ENST00000617410 1153 ntBASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPH3AQ9Y2J0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms