Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.38■□□□□ 0.85
SATB2Q9UPW6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.38■□□□□ 0.85
SATB2Q9UPW6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.38■□□□□ 0.85
SATB2Q9UPW6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
SATB2Q9UPW6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SATB2Q9UPW6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.38■□□□□ 0.85
SATB2Q9UPW6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SATB2Q9UPW6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SATB2Q9UPW6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SATB2Q9UPW6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SATB2Q9UPW6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SATB2Q9UPW6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SATB2Q9UPW6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SATB2Q9UPW6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SATB2Q9UPW6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SATB2Q9UPW6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SATB2Q9UPW6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SATB2Q9UPW6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SATB2Q9UPW6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.37■□□□□ 0.85
SATB2Q9UPW6 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.37■□□□□ 0.85
SATB2Q9UPW6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SATB2Q9UPW6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SATB2Q9UPW6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SATB2Q9UPW6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SATB2Q9UPW6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SATB2Q9UPW6 LINC00526-201ENST00000581067 1875 ntBASIC20.37■□□□□ 0.85
SATB2Q9UPW6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 SLC7A5P1-201ENST00000568957 537 ntBASIC20.36■□□□□ 0.85
SATB2Q9UPW6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.36■□□□□ 0.85
SATB2Q9UPW6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 OR7E47P-201ENST00000546390 1422 ntBASIC20.35■□□□□ 0.85
SATB2Q9UPW6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SATB2Q9UPW6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SATB2Q9UPW6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SATB2Q9UPW6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SATB2Q9UPW6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SATB2Q9UPW6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.34■□□□□ 0.85
SATB2Q9UPW6 AC008694.1-202ENST00000636953 945 ntBASIC20.34■□□□□ 0.85
SATB2Q9UPW6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SATB2Q9UPW6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.34■□□□□ 0.85
SATB2Q9UPW6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SATB2Q9UPW6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.33■□□□□ 0.85
SATB2Q9UPW6 AC007322.4-201ENST00000509611 723 ntBASIC20.33■□□□□ 0.85
SATB2Q9UPW6 EEF1DP3-203ENST00000566025 782 ntBASIC20.33■□□□□ 0.85
SATB2Q9UPW6 OR10C1-204ENST00000622521 1039 ntBASIC20.33■□□□□ 0.85
SATB2Q9UPW6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.33■□□□□ 0.84
SATB2Q9UPW6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SATB2Q9UPW6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SATB2Q9UPW6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SATB2Q9UPW6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SATB2Q9UPW6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SATB2Q9UPW6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms