Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VSX1Q9NZR4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.64■□□□□ 0.57
VSX1Q9NZR4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX1Q9NZR4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
VSX1Q9NZR4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX1Q9NZR4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX1Q9NZR4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VSX1Q9NZR4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX1Q9NZR4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
VSX1Q9NZR4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VSX1Q9NZR4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.63■□□□□ 0.57
VSX1Q9NZR4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VSX1Q9NZR4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VSX1Q9NZR4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.63■□□□□ 0.57
VSX1Q9NZR4 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.63■□□□□ 0.57
VSX1Q9NZR4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.63■□□□□ 0.57
VSX1Q9NZR4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VSX1Q9NZR4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.63■□□□□ 0.57
VSX1Q9NZR4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VSX1Q9NZR4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.62■□□□□ 0.57
VSX1Q9NZR4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 AC005837.3-201ENST00000612163 286 ntBASIC18.62■□□□□ 0.57
VSX1Q9NZR4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VSX1Q9NZR4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VSX1Q9NZR4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.6■□□□□ 0.57
VSX1Q9NZR4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VSX1Q9NZR4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
VSX1Q9NZR4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
VSX1Q9NZR4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VSX1Q9NZR4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VSX1Q9NZR4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.58■□□□□ 0.57
VSX1Q9NZR4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VSX1Q9NZR4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.58■□□□□ 0.57
VSX1Q9NZR4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
VSX1Q9NZR4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VSX1Q9NZR4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms