Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FBXW4P1-201ENST00000426721 2239 ntBASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 KRT18P61-201ENST00000585825 1298 ntBASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PARPBPQ9NWS1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PARPBPQ9NWS1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.64■□□□□ 0.58
PARPBPQ9NWS1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 SLC7A5P1-201ENST00000568957 537 ntBASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 KRT16P2-201ENST00000414673 1423 ntBASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PARPBPQ9NWS1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PARPBPQ9NWS1 SLC25A24-204ENST00000569674 2357 ntBASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 AL137784.2-201ENST00000607332 1000 ntBASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PARPBPQ9NWS1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms