Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CUEDC1Q9NWM3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CUEDC1Q9NWM3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 AF106564.1-201ENST00000607058 2553 ntBASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 POU5F1P4-201ENST00000413175 1085 ntBASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 AC137761.2-201ENST00000561729 223 ntBASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 AC145350.3-201ENST00000569033 163 ntBASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 UBE2DNL-204ENST00000602536 740 ntBASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CUEDC1Q9NWM3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 ABHD17AP1-201ENST00000358206 933 ntBASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.18■□□□□ 0.82
CUEDC1Q9NWM3 FEM1AP4-201ENST00000443167 1987 ntBASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CUEDC1Q9NWM3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CUEDC1Q9NWM3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CUEDC1Q9NWM3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CUEDC1Q9NWM3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CUEDC1Q9NWM3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms