Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 AC005229.4-201ENST00000610085 2198 ntBASIC25.54■■□□□ 1.68
ECHDC1Q9NTX5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ECHDC1Q9NTX5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ECHDC1Q9NTX5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
ECHDC1Q9NTX5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
ECHDC1Q9NTX5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ECHDC1Q9NTX5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ECHDC1Q9NTX5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.52■■□□□ 1.68
ECHDC1Q9NTX5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.52■■□□□ 1.68
ECHDC1Q9NTX5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
ECHDC1Q9NTX5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
ECHDC1Q9NTX5 AL137060.1-201ENST00000618151 2648 ntBASIC25.51■■□□□ 1.68
ECHDC1Q9NTX5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 AC016769.1-201ENST00000409132 1010 ntBASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 KRT18P11-201ENST00000435214 1283 ntBASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ECHDC1Q9NTX5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 RARRES2P11-201ENST00000635158 484 ntBASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ECHDC1Q9NTX5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ECHDC1Q9NTX5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ECHDC1Q9NTX5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.49■■□□□ 1.67
ECHDC1Q9NTX5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.49■■□□□ 1.67
ECHDC1Q9NTX5 AC092437.1-201ENST00000624794 1048 ntBASIC25.49■■□□□ 1.67
ECHDC1Q9NTX5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ECHDC1Q9NTX5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.49■■□□□ 1.67
ECHDC1Q9NTX5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
ECHDC1Q9NTX5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ECHDC1Q9NTX5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
ECHDC1Q9NTX5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.48■■□□□ 1.67
ECHDC1Q9NTX5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
ECHDC1Q9NTX5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.48■■□□□ 1.67
ECHDC1Q9NTX5 IKBKGP1-201ENST00000612193 1073 ntBASIC25.48■■□□□ 1.67
ECHDC1Q9NTX5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC25.48■■□□□ 1.67
ECHDC1Q9NTX5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.48■■□□□ 1.67
ECHDC1Q9NTX5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ECHDC1Q9NTX5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.48■■□□□ 1.67
ECHDC1Q9NTX5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ECHDC1Q9NTX5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
ECHDC1Q9NTX5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC25.48■■□□□ 1.67
ECHDC1Q9NTX5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 RBM17P2-201ENST00000616397 1405 ntBASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ECHDC1Q9NTX5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ECHDC1Q9NTX5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ECHDC1Q9NTX5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ECHDC1Q9NTX5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.46■■□□□ 1.67
ECHDC1Q9NTX5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
ECHDC1Q9NTX5 AC245052.3-201ENST00000450182 901 ntBASIC25.46■■□□□ 1.67
ECHDC1Q9NTX5 MFSD11-216ENST00000590393 1141 ntBASIC25.46■■□□□ 1.67
ECHDC1Q9NTX5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ECHDC1Q9NTX5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.46■■□□□ 1.67
ECHDC1Q9NTX5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms