Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 KRT87P-202ENST00000534226 1464 ntBASIC19.39■□□□□ 0.69
POLE3Q9NRF9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLE3Q9NRF9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLE3Q9NRF9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
POLE3Q9NRF9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLE3Q9NRF9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.37■□□□□ 0.69
POLE3Q9NRF9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLE3Q9NRF9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLE3Q9NRF9 AF106564.1-201ENST00000607058 2553 ntBASIC19.37■□□□□ 0.69
POLE3Q9NRF9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.37■□□□□ 0.69
POLE3Q9NRF9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLE3Q9NRF9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.37■□□□□ 0.69
POLE3Q9NRF9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLE3Q9NRF9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLE3Q9NRF9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
POLE3Q9NRF9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLE3Q9NRF9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLE3Q9NRF9 POU5F1P4-201ENST00000413175 1085 ntBASIC19.36■□□□□ 0.69
POLE3Q9NRF9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
POLE3Q9NRF9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
POLE3Q9NRF9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
POLE3Q9NRF9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLE3Q9NRF9 AC138932.1-201ENST00000534164 6830 ntBASIC19.36■□□□□ 0.69
POLE3Q9NRF9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
POLE3Q9NRF9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLE3Q9NRF9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLE3Q9NRF9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLE3Q9NRF9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.35■□□□□ 0.69
POLE3Q9NRF9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.35■□□□□ 0.69
POLE3Q9NRF9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.35■□□□□ 0.69
POLE3Q9NRF9 AC008175.2-201ENST00000612840 297 ntBASIC19.35■□□□□ 0.69
POLE3Q9NRF9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.35■□□□□ 0.69
POLE3Q9NRF9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLE3Q9NRF9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
POLE3Q9NRF9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLE3Q9NRF9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
POLE3Q9NRF9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLE3Q9NRF9 AP004607.4-201ENST00000530158 1459 ntBASIC19.35■□□□□ 0.69
POLE3Q9NRF9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.35■□□□□ 0.69
POLE3Q9NRF9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLE3Q9NRF9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
POLE3Q9NRF9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLE3Q9NRF9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
POLE3Q9NRF9 YBX1P1-201ENST00000445822 960 ntBASIC19.33■□□□□ 0.68
POLE3Q9NRF9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.33■□□□□ 0.68
POLE3Q9NRF9 AC138907.5-202ENST00000569484 235 ntBASIC19.33■□□□□ 0.68
POLE3Q9NRF9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
POLE3Q9NRF9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
POLE3Q9NRF9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
POLE3Q9NRF9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLE3Q9NRF9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
POLE3Q9NRF9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.33■□□□□ 0.68
POLE3Q9NRF9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
POLE3Q9NRF9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms