Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.98■□□□□ 0.79
TIMMDC1Q9NPL8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.98■□□□□ 0.79
TIMMDC1Q9NPL8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TIMMDC1Q9NPL8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TIMMDC1Q9NPL8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TIMMDC1Q9NPL8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TIMMDC1Q9NPL8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.98■□□□□ 0.79
TIMMDC1Q9NPL8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.98■□□□□ 0.79
TIMMDC1Q9NPL8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 CCDC92B-201ENST00000575506 885 ntBASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMMDC1Q9NPL8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 DUX4L2-201ENST00000561772 1275 ntBASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 DUX4L6-201ENST00000626483 1275 ntBASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 DUX4L1-201ENST00000627662 1275 ntBASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 DUX4L8-201ENST00000629013 1275 ntBASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 DUX4L3-201ENST00000630187 1275 ntBASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 DUX4L7-201ENST00000630678 1275 ntBASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 DUX4L5-201ENST00000630834 1275 ntBASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMMDC1Q9NPL8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 KRT18P14-201ENST00000534205 1250 ntBASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMMDC1Q9NPL8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 BX005040.4-201ENST00000637145 1518 ntBASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 TERF1P2-201ENST00000583350 1212 ntBASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 SMUG1P1-201ENST00000590640 811 ntBASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.94■□□□□ 0.78
TIMMDC1Q9NPL8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.93■□□□□ 0.78
TIMMDC1Q9NPL8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
TIMMDC1Q9NPL8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TIMMDC1Q9NPL8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.93■□□□□ 0.78
TIMMDC1Q9NPL8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms