Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.3■□□□□ 0.68
ZNF556Q9HAH1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ZNF556Q9HAH1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 UNC93B8-201ENST00000511903 705 ntBASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 AP005212.1-201ENST00000581547 1997 ntBASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ZNF556Q9HAH1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF556Q9HAH1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
ZNF556Q9HAH1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
ZNF556Q9HAH1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF556Q9HAH1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
ZNF556Q9HAH1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.27■□□□□ 0.67
ZNF556Q9HAH1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 AC009299.2-201ENST00000482477 511 ntBASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 AL356740.2-201ENST00000601559 647 ntBASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF556Q9HAH1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF556Q9HAH1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms