Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC055733.4-201ENST00000638462 1354 ntBASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 FEM1AP4-201ENST00000443167 1987 ntBASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.69■□□□□ 0.58
SEC61A2Q9H9S3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 AL121603.2-201ENST00000557373 2117 ntBASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEC61A2Q9H9S3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 AC034268.1-201ENST00000441047 882 ntBASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SEC61A2Q9H9S3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 KRT18P61-201ENST00000585825 1298 ntBASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SEC61A2Q9H9S3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 KRT18P5-201ENST00000436075 1291 ntBASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms