Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.94■■□□□ 1.26
VPS16Q9H269 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
VPS16Q9H269 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
VPS16Q9H269 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.94■■□□□ 1.26
VPS16Q9H269 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.94■■□□□ 1.26
VPS16Q9H269 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.94■■□□□ 1.26
VPS16Q9H269 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.94■■□□□ 1.26
VPS16Q9H269 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.94■■□□□ 1.26
VPS16Q9H269 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
VPS16Q9H269 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
VPS16Q9H269 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS16Q9H269 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.94■■□□□ 1.26
VPS16Q9H269 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
VPS16Q9H269 AC005224.4-201ENST00000583262 1652 ntBASIC22.93■■□□□ 1.26
VPS16Q9H269 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.93■■□□□ 1.26
VPS16Q9H269 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.93■■□□□ 1.26
VPS16Q9H269 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS16Q9H269 AC008406.3-201ENST00000620001 1374 ntBASIC22.93■■□□□ 1.26
VPS16Q9H269 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
VPS16Q9H269 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
VPS16Q9H269 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.93■■□□□ 1.26
VPS16Q9H269 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.93■■□□□ 1.26
VPS16Q9H269 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.93■■□□□ 1.26
VPS16Q9H269 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.93■■□□□ 1.26
VPS16Q9H269 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
VPS16Q9H269 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS16Q9H269 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS16Q9H269 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
VPS16Q9H269 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
VPS16Q9H269 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
VPS16Q9H269 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
VPS16Q9H269 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
VPS16Q9H269 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.92■■□□□ 1.26
VPS16Q9H269 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.92■■□□□ 1.26
VPS16Q9H269 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.92■■□□□ 1.26
VPS16Q9H269 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.92■■□□□ 1.26
VPS16Q9H269 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.92■■□□□ 1.26
VPS16Q9H269 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.92■■□□□ 1.26
VPS16Q9H269 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
VPS16Q9H269 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
VPS16Q9H269 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
VPS16Q9H269 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.91■■□□□ 1.26
VPS16Q9H269 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.91■■□□□ 1.26
VPS16Q9H269 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS16Q9H269 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
VPS16Q9H269 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS16Q9H269 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS16Q9H269 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
VPS16Q9H269 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.91■■□□□ 1.26
VPS16Q9H269 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.91■■□□□ 1.26
VPS16Q9H269 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
VPS16Q9H269 AC073314.1-201ENST00000568729 2216 ntBASIC22.91■■□□□ 1.26
VPS16Q9H269 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.91■■□□□ 1.26
VPS16Q9H269 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS16Q9H269 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
VPS16Q9H269 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
VPS16Q9H269 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
VPS16Q9H269 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
VPS16Q9H269 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
VPS16Q9H269 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS16Q9H269 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
VPS16Q9H269 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS16Q9H269 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
VPS16Q9H269 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.9■■□□□ 1.26
VPS16Q9H269 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
VPS16Q9H269 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.9■■□□□ 1.26
VPS16Q9H269 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.9■■□□□ 1.26
VPS16Q9H269 AC027682.1-201ENST00000562846 899 ntBASIC22.9■■□□□ 1.26
VPS16Q9H269 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
VPS16Q9H269 BX005040.4-201ENST00000637145 1518 ntBASIC22.9■■□□□ 1.26
VPS16Q9H269 AC121338.2-201ENST00000622535 1744 ntBASIC22.9■■□□□ 1.26
VPS16Q9H269 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.9■■□□□ 1.26
VPS16Q9H269 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS16Q9H269 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.9■■□□□ 1.26
VPS16Q9H269 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS16Q9H269 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS16Q9H269 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms