Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
NUCKS1Q9H1E3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
NUCKS1Q9H1E3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NUCKS1Q9H1E3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NUCKS1Q9H1E3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
NUCKS1Q9H1E3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.62■■□□□ 1.21
NUCKS1Q9H1E3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
NUCKS1Q9H1E3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NUCKS1Q9H1E3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.62■■□□□ 1.21
NUCKS1Q9H1E3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.62■■□□□ 1.21
NUCKS1Q9H1E3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NUCKS1Q9H1E3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NUCKS1Q9H1E3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 MIR572-201ENST00000384983 95 ntBASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 AL121603.2-201ENST00000557373 2117 ntBASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.61■■□□□ 1.21
NUCKS1Q9H1E3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 SLC25A24-204ENST00000569674 2357 ntBASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NUCKS1Q9H1E3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NUCKS1Q9H1E3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 AC005224.4-201ENST00000583262 1652 ntBASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 AC105233.4-201ENST00000642045 216 ntBASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NUCKS1Q9H1E3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NUCKS1Q9H1E3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NUCKS1Q9H1E3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NUCKS1Q9H1E3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NUCKS1Q9H1E3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.58■■□□□ 1.2
NUCKS1Q9H1E3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NUCKS1Q9H1E3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.58■■□□□ 1.2
NUCKS1Q9H1E3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.57■■□□□ 1.2
NUCKS1Q9H1E3 RARRES2P6-201ENST00000567333 442 ntBASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms