Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX6-2Q9C056 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NKX6-2Q9C056 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.89■□□□□ 0.3
NKX6-2Q9C056 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.89■□□□□ 0.3
NKX6-2Q9C056 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 AC005332.8-201ENST00000622750 2735 ntBASIC16.89■□□□□ 0.29
NKX6-2Q9C056 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NKX6-2Q9C056 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-2Q9C056 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NKX6-2Q9C056 AC020916.1-201ENST00000587762 1774 ntBASIC16.87■□□□□ 0.29
NKX6-2Q9C056 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-2Q9C056 OXCT2P1-201ENST00000447263 1535 ntBASIC16.87■□□□□ 0.29
NKX6-2Q9C056 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-2Q9C056 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-2Q9C056 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-2Q9C056 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-2Q9C056 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-2Q9C056 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.87■□□□□ 0.29
NKX6-2Q9C056 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.87■□□□□ 0.29
NKX6-2Q9C056 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.87■□□□□ 0.29
NKX6-2Q9C056 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NKX6-2Q9C056 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-2Q9C056 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 GPX1-201ENST00000419349 1106 ntBASIC16.86■□□□□ 0.29
NKX6-2Q9C056 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-2Q9C056 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-2Q9C056 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms