Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AP006587.3-201ENST00000525742 1516 ntBASIC21.53■■□□□ 1.04
FOXP3Q9BZS1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXP3Q9BZS1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXP3Q9BZS1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXP3Q9BZS1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXP3Q9BZS1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXP3Q9BZS1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 IKBKGP1-201ENST00000612193 1073 ntBASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 MIR6084-201ENST00000622012 110 ntBASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.52■■□□□ 1.04
FOXP3Q9BZS1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
FOXP3Q9BZS1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
FOXP3Q9BZS1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.52■■□□□ 1.03
FOXP3Q9BZS1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXP3Q9BZS1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 IGHV3-19-201ENST00000521488 291 ntBASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.5■■□□□ 1.03
FOXP3Q9BZS1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.49■■□□□ 1.03
FOXP3Q9BZS1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 AP005212.1-201ENST00000581547 1997 ntBASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 KRT18P5-201ENST00000436075 1291 ntBASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 DUX4L2-201ENST00000561772 1275 ntBASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 AC022517.1-201ENST00000592429 346 ntBASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 DUX4L6-201ENST00000626483 1275 ntBASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 DUX4L1-201ENST00000627662 1275 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms