Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-3Q9BYR6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 MTCO2P7-201ENST00000446518 666 ntBASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 AL513343.1-201ENST00000451818 792 ntBASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 MTCYBP41-201ENST00000528913 1123 ntBASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 OR4R2P-201ENST00000530815 597 ntBASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 AC107304.1-201ENST00000604229 296 ntBASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 AL353600.1-201ENST00000608148 251 ntBASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 HULC.1-201ENST00000612720 240 ntBASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 AL353684.1-201ENST00000622677 1120 ntBASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 AC011525.2-202ENST00000590611 1657 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP3-3Q9BYR6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AC024341.1-201ENST00000526444 1552 ntBASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AL121749.1-202ENST00000609313 2153 ntBASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AL365214.1-201ENST00000404237 997 ntBASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AL135937.1-201ENST00000418690 729 ntTSL 3 BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 NMNAT1P2-201ENST00000435192 860 ntBASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 RN7SKP287-201ENST00000516546 266 ntBASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 BNIP3P31-201ENST00000604515 566 ntBASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AC012306.2-201ENST00000609350 630 ntBASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AC108125.1-201ENST00000622310 543 ntBASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AL078595.3-201ENST00000623815 1166 ntBASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AL163152.1-201ENST00000642001 374 ntBASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-3Q9BYR6 AC005736.1-201ENST00000576810 1394 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 AC063923.1-201ENST00000478982 1619 ntBASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 DPM1-203ENST00000371588 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 MTATP6P23-201ENST00000440153 476 ntBASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 OR7E26P-201ENST00000502808 1006 ntBASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 LTV1P1-201ENST00000510683 1237 ntBASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 AC124293.1-201ENST00000530034 493 ntBASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 AL031602.1-201ENST00000633169 911 ntBASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 AC003992.1-201ENST00000635364 557 ntBASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 AC010864.1-201ENST00000609407 1511 ntBASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC12.81□□□□□ -0.36
KRTAP3-3Q9BYR6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms