Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
NICN1Q9BSH3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 MIR4466-201ENST00000606121 54 ntBASIC17.89■□□□□ 0.45
NICN1Q9BSH3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NICN1Q9BSH3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NICN1Q9BSH3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 DUX4L19-201ENST00000557448 1267 ntBASIC17.87■□□□□ 0.45
NICN1Q9BSH3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 AC011298.3-201ENST00000615796 283 ntBASIC17.87■□□□□ 0.45
NICN1Q9BSH3 AP005212.1-201ENST00000581547 1997 ntBASIC17.87■□□□□ 0.45
NICN1Q9BSH3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NICN1Q9BSH3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 AL391422.3-201ENST00000603791 2761 ntBASIC17.86■□□□□ 0.45
NICN1Q9BSH3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
NICN1Q9BSH3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 GABARAPL3-202ENST00000624044 1851 ntBASIC17.85■□□□□ 0.45
NICN1Q9BSH3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NICN1Q9BSH3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms