Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 AC126544.1-201ENST00000580842 1059 ntBASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 AC007225.1-201ENST00000566331 1836 ntBASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPPED1Q9BRF8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPPED1Q9BRF8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CPPED1Q9BRF8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 UNC93B3-201ENST00000308076 687 ntBASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.64■□□□□ 0.73
CPPED1Q9BRF8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 AC005224.4-201ENST00000583262 1652 ntBASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 AC024257.2-201ENST00000549699 147 ntBASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CPPED1Q9BRF8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 BX005040.4-201ENST00000637145 1518 ntBASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 AL121603.2-201ENST00000557373 2117 ntBASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 AC020907.5-201ENST00000624372 1936 ntBASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPPED1Q9BRF8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 AL136162.1-201ENST00000607711 1078 ntBASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPPED1Q9BRF8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPPED1Q9BRF8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPPED1Q9BRF8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.6■□□□□ 0.73
CPPED1Q9BRF8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPPED1Q9BRF8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CPPED1Q9BRF8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPPED1Q9BRF8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms