Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LITAFQ99732 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LITAFQ99732 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC13.95□□□□□ -0.18
LITAFQ99732 AL499627.2-201ENST00000606283 725 ntBASIC13.95□□□□□ -0.18
LITAFQ99732 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC13.95□□□□□ -0.18
LITAFQ99732 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.95□□□□□ -0.18
LITAFQ99732 TCF3P1-201ENST00000423021 1937 ntBASIC13.95□□□□□ -0.18
LITAFQ99732 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LITAFQ99732 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LITAFQ99732 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LITAFQ99732 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LITAFQ99732 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LITAFQ99732 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.95□□□□□ -0.18
LITAFQ99732 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.95□□□□□ -0.18
LITAFQ99732 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LITAFQ99732 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.95□□□□□ -0.18
LITAFQ99732 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LITAFQ99732 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.95□□□□□ -0.18
LITAFQ99732 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.94□□□□□ -0.18
LITAFQ99732 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LITAFQ99732 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.94□□□□□ -0.18
LITAFQ99732 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LITAFQ99732 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LITAFQ99732 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.94□□□□□ -0.18
LITAFQ99732 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LITAFQ99732 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.93□□□□□ -0.18
LITAFQ99732 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.93□□□□□ -0.18
LITAFQ99732 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.93□□□□□ -0.18
LITAFQ99732 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.93□□□□□ -0.18
LITAFQ99732 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC13.93□□□□□ -0.18
LITAFQ99732 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LITAFQ99732 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LITAFQ99732 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LITAFQ99732 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC13.93□□□□□ -0.18
LITAFQ99732 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.93□□□□□ -0.18
LITAFQ99732 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LITAFQ99732 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.93□□□□□ -0.18
LITAFQ99732 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LITAFQ99732 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC13.93□□□□□ -0.18
LITAFQ99732 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.92□□□□□ -0.18
LITAFQ99732 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
LITAFQ99732 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LITAFQ99732 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.92□□□□□ -0.18
LITAFQ99732 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 AC125437.2-201ENST00000625180 2167 ntBASIC13.92□□□□□ -0.18
LITAFQ99732 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LITAFQ99732 IDNK-201ENST00000376417 511 ntTSL 5 BASIC13.92□□□□□ -0.18
LITAFQ99732 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC13.92□□□□□ -0.18
LITAFQ99732 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC13.92□□□□□ -0.18
LITAFQ99732 MIR7108-201ENST00000614319 87 ntBASIC13.92□□□□□ -0.18
LITAFQ99732 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC13.92□□□□□ -0.18
LITAFQ99732 AC009102.2-201ENST00000606772 1639 ntBASIC13.92□□□□□ -0.18
LITAFQ99732 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LITAFQ99732 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.91□□□□□ -0.18
LITAFQ99732 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LITAFQ99732 AC026471.1-201ENST00000564629 3026 ntBASIC13.91□□□□□ -0.18
LITAFQ99732 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LITAFQ99732 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC13.91□□□□□ -0.18
LITAFQ99732 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LITAFQ99732 TK2-202ENST00000417693 1046 ntTSL 2 BASIC13.91□□□□□ -0.18
LITAFQ99732 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC13.91□□□□□ -0.18
LITAFQ99732 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC13.91□□□□□ -0.18
LITAFQ99732 MIR6722-201ENST00000617286 78 ntBASIC13.91□□□□□ -0.18
LITAFQ99732 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LITAFQ99732 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
LITAFQ99732 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
LITAFQ99732 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC13.91□□□□□ -0.18
LITAFQ99732 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LITAFQ99732 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.91□□□□□ -0.18
LITAFQ99732 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 RNF126P1-201ENST00000567452 1320 ntBASIC13.9□□□□□ -0.18
LITAFQ99732 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms