Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV9Q99603 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV9Q99603 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.28■□□□□ 0.2
TRGV9Q99603 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV9Q99603 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
TRGV9Q99603 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV9Q99603 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV9Q99603 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV9Q99603 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV9Q99603 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRGV9Q99603 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.28■□□□□ 0.2
TRGV9Q99603 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV9Q99603 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.28■□□□□ 0.2
TRGV9Q99603 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.28■□□□□ 0.2
TRGV9Q99603 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV9Q99603 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV9Q99603 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRGV9Q99603 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRGV9Q99603 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV9Q99603 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRGV9Q99603 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRGV9Q99603 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV9Q99603 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV9Q99603 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRGV9Q99603 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV9Q99603 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.27■□□□□ 0.2
TRGV9Q99603 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV9Q99603 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.27■□□□□ 0.2
TRGV9Q99603 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV9Q99603 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRGV9Q99603 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV9Q99603 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.27■□□□□ 0.2
TRGV9Q99603 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.27■□□□□ 0.2
TRGV9Q99603 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.27■□□□□ 0.2
TRGV9Q99603 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV9Q99603 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV9Q99603 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRGV9Q99603 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRGV9Q99603 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRGV9Q99603 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TRGV9Q99603 AC005224.4-201ENST00000583262 1652 ntBASIC16.27■□□□□ 0.19
TRGV9Q99603 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.27■□□□□ 0.19
TRGV9Q99603 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.27■□□□□ 0.19
TRGV9Q99603 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRGV9Q99603 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TRGV9Q99603 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TRGV9Q99603 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV9Q99603 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.26■□□□□ 0.19
TRGV9Q99603 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
TRGV9Q99603 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.26■□□□□ 0.19
TRGV9Q99603 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.26■□□□□ 0.19
TRGV9Q99603 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV9Q99603 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV9Q99603 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV9Q99603 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRGV9Q99603 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.26■□□□□ 0.19
TRGV9Q99603 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV9Q99603 AC024257.2-201ENST00000549699 147 ntBASIC16.26■□□□□ 0.19
TRGV9Q99603 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV9Q99603 AL136162.1-201ENST00000607711 1078 ntBASIC16.26■□□□□ 0.19
TRGV9Q99603 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.26■□□□□ 0.19
TRGV9Q99603 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV9Q99603 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.26■□□□□ 0.19
TRGV9Q99603 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
TRGV9Q99603 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
TRGV9Q99603 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV9Q99603 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
TRGV9Q99603 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.26■□□□□ 0.19
TRGV9Q99603 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
TRGV9Q99603 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV9Q99603 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 AC135279.3-201ENST00000610945 1311 ntBASIC16.25■□□□□ 0.19
TRGV9Q99603 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.25■□□□□ 0.19
TRGV9Q99603 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.25■□□□□ 0.19
TRGV9Q99603 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 AC105233.4-201ENST00000642045 216 ntBASIC16.25■□□□□ 0.19
TRGV9Q99603 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.25■□□□□ 0.19
TRGV9Q99603 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.25■□□□□ 0.19
TRGV9Q99603 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV9Q99603 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRGV9Q99603 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRGV9Q99603 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.24■□□□□ 0.19
TRGV9Q99603 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
TRGV9Q99603 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms