Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CLPTM1LQ96KA5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLPTM1LQ96KA5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 SMG8-203ENST00000578922 2178 ntBASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 AL162377.1-201ENST00000618844 1793 ntBASIC20.06■□□□□ 0.8
CLPTM1LQ96KA5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 AC007225.1-201ENST00000566331 1836 ntBASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 AC103834.1-201ENST00000520383 144 ntBASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.05■□□□□ 0.8
CLPTM1LQ96KA5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 AC098818.2-201ENST00000564925 2320 ntBASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 AC099778.1-201ENST00000568593 1911 ntBASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 AC103724.3-201ENST00000564481 992 ntBASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 AL451085.2-201ENST00000605085 799 ntBASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPTM1LQ96KA5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.03■□□□□ 0.8
CLPTM1LQ96KA5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLPTM1LQ96KA5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.02■□□□□ 0.8
CLPTM1LQ96KA5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLPTM1LQ96KA5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLPTM1LQ96KA5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLPTM1LQ96KA5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLPTM1LQ96KA5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.02■□□□□ 0.8
CLPTM1LQ96KA5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLPTM1LQ96KA5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.02■□□□□ 0.8
CLPTM1LQ96KA5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLPTM1LQ96KA5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLPTM1LQ96KA5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLPTM1LQ96KA5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CLPTM1LQ96KA5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.02■□□□□ 0.79
CLPTM1LQ96KA5 AC121338.2-201ENST00000622535 1744 ntBASIC20.02■□□□□ 0.79
CLPTM1LQ96KA5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLPTM1LQ96KA5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 AC021242.3-201ENST00000607598 1377 ntBASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 NTF6A-201ENST00000591175 560 ntBASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 AC116562.4-201ENST00000641316 2276 ntBASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CLPTM1LQ96KA5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms