Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC46Q96FV0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LRRC46Q96FV0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC46Q96FV0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC46Q96FV0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC46Q96FV0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC46Q96FV0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.74■□□□□ 0.59
LRRC46Q96FV0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC46Q96FV0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC46Q96FV0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC46Q96FV0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC46Q96FV0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.73■□□□□ 0.59
LRRC46Q96FV0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC46Q96FV0 AC133552.2-202ENST00000575694 574 ntBASIC18.73■□□□□ 0.59
LRRC46Q96FV0 AC053503.5-201ENST00000601508 636 ntBASIC18.73■□□□□ 0.59
LRRC46Q96FV0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC46Q96FV0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC46Q96FV0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC46Q96FV0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LRRC46Q96FV0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
LRRC46Q96FV0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC46Q96FV0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC46Q96FV0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 AIRN-201ENST00000601203 4374 ntBASIC18.72■□□□□ 0.59
LRRC46Q96FV0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 SLC7A5P2-201ENST00000553010 536 ntBASIC18.72■□□□□ 0.59
LRRC46Q96FV0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 AC105036.2-201ENST00000569468 176 ntBASIC18.72■□□□□ 0.59
LRRC46Q96FV0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC46Q96FV0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 ABHD17AP1-201ENST00000358206 933 ntBASIC18.71■□□□□ 0.59
LRRC46Q96FV0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 AL138781.1-201ENST00000566567 1274 ntBASIC18.71■□□□□ 0.59
LRRC46Q96FV0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 AL050303.2-201ENST00000619798 666 ntBASIC18.71■□□□□ 0.59
LRRC46Q96FV0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC46Q96FV0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
LRRC46Q96FV0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 TERF1P5-201ENST00000477545 1207 ntBASIC18.7■□□□□ 0.58
LRRC46Q96FV0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 KRT18P6-201ENST00000555540 1265 ntBASIC18.7■□□□□ 0.58
LRRC46Q96FV0 AC069236.1-201ENST00000604339 616 ntBASIC18.7■□□□□ 0.58
LRRC46Q96FV0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC46Q96FV0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms