Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 FEM1AP4-201ENST00000443167 1987 ntBASIC26.97■■□□□ 1.91
ZNF428Q96B54 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
ZNF428Q96B54 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ZNF428Q96B54 BRI3-207ENST00000539286 699 ntTSL 2 BASIC26.97■■□□□ 1.91
ZNF428Q96B54 DUX4L16-201ENST00000555130 1264 ntBASIC26.97■■□□□ 1.91
ZNF428Q96B54 SLC7A5P1-201ENST00000568957 537 ntBASIC26.97■■□□□ 1.91
ZNF428Q96B54 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.97■■□□□ 1.91
ZNF428Q96B54 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.97■■□□□ 1.91
ZNF428Q96B54 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ZNF428Q96B54 AL109923.1-201ENST00000618799 583 ntBASIC26.97■■□□□ 1.91
ZNF428Q96B54 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC26.97■■□□□ 1.91
ZNF428Q96B54 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.97■■□□□ 1.91
ZNF428Q96B54 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ZNF428Q96B54 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.97■■□□□ 1.91
ZNF428Q96B54 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF428Q96B54 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF428Q96B54 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF428Q96B54 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
ZNF428Q96B54 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF428Q96B54 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF428Q96B54 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
ZNF428Q96B54 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.96■■□□□ 1.91
ZNF428Q96B54 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC26.96■■□□□ 1.91
ZNF428Q96B54 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF428Q96B54 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC26.96■■□□□ 1.91
ZNF428Q96B54 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.96■■□□□ 1.91
ZNF428Q96B54 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF428Q96B54 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF428Q96B54 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF428Q96B54 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF428Q96B54 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC26.95■■□□□ 1.91
ZNF428Q96B54 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
ZNF428Q96B54 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.95■■□□□ 1.91
ZNF428Q96B54 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.95■■□□□ 1.91
ZNF428Q96B54 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
ZNF428Q96B54 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ZNF428Q96B54 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ZNF428Q96B54 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.95■■□□□ 1.9
ZNF428Q96B54 SLC7A5P2-201ENST00000553010 536 ntBASIC26.95■■□□□ 1.9
ZNF428Q96B54 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC26.95■■□□□ 1.9
ZNF428Q96B54 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
ZNF428Q96B54 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ZNF428Q96B54 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
ZNF428Q96B54 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.94■■□□□ 1.9
ZNF428Q96B54 AC120498.10-201ENST00000621827 505 ntBASIC26.94■■□□□ 1.9
ZNF428Q96B54 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ZNF428Q96B54 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ZNF428Q96B54 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ZNF428Q96B54 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
ZNF428Q96B54 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ZNF428Q96B54 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ZNF428Q96B54 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ZNF428Q96B54 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC26.93■■□□□ 1.9
ZNF428Q96B54 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.93■■□□□ 1.9
ZNF428Q96B54 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ZNF428Q96B54 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ZNF428Q96B54 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
ZNF428Q96B54 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZNF428Q96B54 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.92■■□□□ 1.9
ZNF428Q96B54 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
ZNF428Q96B54 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZNF428Q96B54 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZNF428Q96B54 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZNF428Q96B54 MYCNOS-205ENST00000641950 531 ntBASIC26.92■■□□□ 1.9
ZNF428Q96B54 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
ZNF428Q96B54 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
ZNF428Q96B54 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.92■■□□□ 1.9
ZNF428Q96B54 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZNF428Q96B54 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZNF428Q96B54 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC26.91■■□□□ 1.9
ZNF428Q96B54 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ZNF428Q96B54 AL024507.2-201ENST00000606070 2574 ntBASIC26.91■■□□□ 1.9
ZNF428Q96B54 NCF1B-203ENST00000435988 1254 ntBASIC26.91■■□□□ 1.9
ZNF428Q96B54 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ZNF428Q96B54 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ZNF428Q96B54 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ZNF428Q96B54 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.91■■□□□ 1.9
ZNF428Q96B54 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.91■■□□□ 1.9
ZNF428Q96B54 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZNF428Q96B54 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
ZNF428Q96B54 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ZNF428Q96B54 KRT18P11-201ENST00000435214 1283 ntBASIC26.9■■□□□ 1.9
ZNF428Q96B54 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
ZNF428Q96B54 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZNF428Q96B54 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
ZNF428Q96B54 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
ZNF428Q96B54 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ZNF428Q96B54 AL049796.1-201ENST00000565336 1766 ntBASIC26.89■■□□□ 1.9
ZNF428Q96B54 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
ZNF428Q96B54 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ZNF428Q96B54 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.89■■□□□ 1.9
ZNF428Q96B54 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.89■■□□□ 1.9
ZNF428Q96B54 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.89■■□□□ 1.9
ZNF428Q96B54 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26.89■■□□□ 1.9
ZNF428Q96B54 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ZNF428Q96B54 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
ZNF428Q96B54 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
ZNF428Q96B54 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
ZNF428Q96B54 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
ZNF428Q96B54 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms