Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBE2E3Q969T4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE2E3Q969T4 AF106564.1-201ENST00000607058 2553 ntBASIC20.08■□□□□ 0.81
UBE2E3Q969T4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE2E3Q969T4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE2E3Q969T4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
UBE2E3Q969T4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBE2E3Q969T4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.08■□□□□ 0.81
UBE2E3Q969T4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
UBE2E3Q969T4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.08■□□□□ 0.81
UBE2E3Q969T4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.08■□□□□ 0.81
UBE2E3Q969T4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.08■□□□□ 0.81
UBE2E3Q969T4 KRT16P2-201ENST00000414673 1423 ntBASIC20.08■□□□□ 0.8
UBE2E3Q969T4 AC061975.6-201ENST00000579045 1553 ntBASIC20.08■□□□□ 0.8
UBE2E3Q969T4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
UBE2E3Q969T4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 AC104187.1-201ENST00000607510 612 ntBASIC20.07■□□□□ 0.8
UBE2E3Q969T4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2E3Q969T4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2E3Q969T4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 KRT18P20-201ENST00000548986 1279 ntBASIC20.05■□□□□ 0.8
UBE2E3Q969T4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 AP001160.3-201ENST00000601484 763 ntBASIC20.05■□□□□ 0.8
UBE2E3Q969T4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2E3Q969T4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 KRT19P1-201ENST00000405746 1186 ntBASIC20.04■□□□□ 0.8
UBE2E3Q969T4 AC097381.1-201ENST00000429019 1296 ntBASIC20.04■□□□□ 0.8
UBE2E3Q969T4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.04■□□□□ 0.8
UBE2E3Q969T4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2E3Q969T4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
UBE2E3Q969T4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms