Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40AQ8WXH6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 SLC47A1P1-202ENST00000449666 945 ntBASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 AL031602.1-201ENST00000633169 911 ntBASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40AQ8WXH6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 IRS3P-201ENST00000223076 1006 ntBASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB40AQ8WXH6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 OR2I1P-207ENST00000453522 948 ntBASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 AC007952.6-201ENST00000573168 2673 ntBASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 AC003957.1-201ENST00000625108 2673 ntBASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB40AQ8WXH6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40AQ8WXH6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB40AQ8WXH6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB40AQ8WXH6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB40AQ8WXH6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB40AQ8WXH6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB40AQ8WXH6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RAB40AQ8WXH6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RAB40AQ8WXH6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB40AQ8WXH6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB40AQ8WXH6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RAB40AQ8WXH6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB40AQ8WXH6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.27■□□□□ 0.51
RAB40AQ8WXH6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB40AQ8WXH6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RAB40AQ8WXH6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
RAB40AQ8WXH6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB40AQ8WXH6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms