Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC009078.2-202ENST00000463353 338 ntBASIC8.65□□□□□ -1.03
SYNE2Q8WXH0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC8.65□□□□□ -1.03
SYNE2Q8WXH0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC8.65□□□□□ -1.03
SYNE2Q8WXH0 AC096887.2-201ENST00000623443 1957 ntBASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 AC008622.2-201ENST00000617006 1229 ntBASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 AC138907.5-202ENST00000569484 235 ntBASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 AK4P3-201ENST00000418260 669 ntBASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 FAM8A6P-201ENST00000407496 1135 ntBASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC8.64□□□□□ -1.03
SYNE2Q8WXH0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 AL355355.2-201ENST00000442321 338 ntBASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 RBM17P1-201ENST00000453646 1190 ntBASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 ECEL1P2-202ENST00000465689 757 ntBASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 AC239800.4-201ENST00000603712 296 ntBASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 AC012313.10-201ENST00000623509 926 ntBASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 AL671277.2-201ENST00000458060 996 ntBASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 LIN28AP1-201ENST00000429574 405 ntBASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 AC140113.2-201ENST00000604370 208 ntBASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC8.63□□□□□ -1.03
SYNE2Q8WXH0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 FITM1-202ENST00000559294 800 ntBASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 MIR1238-201ENST00000408483 83 ntBASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 AL160237.2-201ENST00000556165 472 ntBASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 AF228730.7-201ENST00000641842 219 ntBASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 LINC01529-204ENST00000636474 1715 ntBASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 AC097639.1-201ENST00000565519 1891 ntBASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYNE2Q8WXH0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms