Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.16□□□□□ -0.14
COPS9Q8WXC6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COPS9Q8WXC6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 AC133552.2-201ENST00000619106 1032 ntBASIC14.14□□□□□ -0.15
COPS9Q8WXC6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS9Q8WXC6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 AP005212.1-201ENST00000581547 1997 ntBASIC14.13□□□□□ -0.15
COPS9Q8WXC6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS9Q8WXC6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms