Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 AC131281.2-201ENST00000520478 145 ntBASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BBS1Q8NFJ9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.77■□□□□ 0.6
BBS1Q8NFJ9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
BBS1Q8NFJ9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
BBS1Q8NFJ9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 AC027702.1-201ENST00000563810 1770 ntBASIC18.76■□□□□ 0.59
BBS1Q8NFJ9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 AC133561.4-201ENST00000566112 224 ntBASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BBS1Q8NFJ9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 AC121338.2-201ENST00000622535 1744 ntBASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 AL121603.2-201ENST00000557373 2117 ntBASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BBS1Q8NFJ9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms