Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RNF169Q8NCN4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RNF169Q8NCN4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RNF169Q8NCN4 AC092118.2-201ENST00000613495 667 ntBASIC22.77■■□□□ 1.24
RNF169Q8NCN4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.77■■□□□ 1.24
RNF169Q8NCN4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RNF169Q8NCN4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RNF169Q8NCN4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RNF169Q8NCN4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RNF169Q8NCN4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
RNF169Q8NCN4 FAM99A-202ENST00000538190 1989 ntBASIC22.76■■□□□ 1.23
RNF169Q8NCN4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF169Q8NCN4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF169Q8NCN4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
RNF169Q8NCN4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
RNF169Q8NCN4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.76■■□□□ 1.23
RNF169Q8NCN4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.76■■□□□ 1.23
RNF169Q8NCN4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF169Q8NCN4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF169Q8NCN4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF169Q8NCN4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RNF169Q8NCN4 C11orf96-202ENST00000528572 1834 ntBASIC22.75■■□□□ 1.23
RNF169Q8NCN4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
RNF169Q8NCN4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RNF169Q8NCN4 AC010980.2-201ENST00000587099 1412 ntBASIC22.75■■□□□ 1.23
RNF169Q8NCN4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RNF169Q8NCN4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
RNF169Q8NCN4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RNF169Q8NCN4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
RNF169Q8NCN4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.75■■□□□ 1.23
RNF169Q8NCN4 RARRES2P4-201ENST00000514074 484 ntBASIC22.75■■□□□ 1.23
RNF169Q8NCN4 AC243732.1-201ENST00000612648 864 ntBASIC22.75■■□□□ 1.23
RNF169Q8NCN4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
RNF169Q8NCN4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
RNF169Q8NCN4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.75■■□□□ 1.23
RNF169Q8NCN4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF169Q8NCN4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF169Q8NCN4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF169Q8NCN4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RNF169Q8NCN4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF169Q8NCN4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RNF169Q8NCN4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.74■■□□□ 1.23
RNF169Q8NCN4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.74■■□□□ 1.23
RNF169Q8NCN4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.74■■□□□ 1.23
RNF169Q8NCN4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RNF169Q8NCN4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF169Q8NCN4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
RNF169Q8NCN4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
RNF169Q8NCN4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF169Q8NCN4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 AC245052.3-201ENST00000450182 901 ntBASIC22.71■■□□□ 1.23
RNF169Q8NCN4 AC097658.1-201ENST00000475555 843 ntBASIC22.71■■□□□ 1.23
RNF169Q8NCN4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 AL162412.1-201ENST00000567129 965 ntBASIC22.71■■□□□ 1.23
RNF169Q8NCN4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.71■■□□□ 1.23
RNF169Q8NCN4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RNF169Q8NCN4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 POU5F1P3-201ENST00000428824 1078 ntBASIC22.7■■□□□ 1.22
RNF169Q8NCN4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms