Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 AC026310.3-201ENST00000625186 2373 ntBASIC23.67■■□□□ 1.38
RETREG2Q8NC44 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RETREG2Q8NC44 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RETREG2Q8NC44 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RETREG2Q8NC44 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.66■■□□□ 1.38
RETREG2Q8NC44 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RETREG2Q8NC44 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
RETREG2Q8NC44 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.66■■□□□ 1.38
RETREG2Q8NC44 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.66■■□□□ 1.38
RETREG2Q8NC44 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.66■■□□□ 1.38
RETREG2Q8NC44 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RETREG2Q8NC44 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
RETREG2Q8NC44 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RETREG2Q8NC44 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.66■■□□□ 1.38
RETREG2Q8NC44 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RETREG2Q8NC44 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.64■■□□□ 1.38
RETREG2Q8NC44 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RETREG2Q8NC44 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RETREG2Q8NC44 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
RETREG2Q8NC44 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.64■■□□□ 1.37
RETREG2Q8NC44 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.64■■□□□ 1.37
RETREG2Q8NC44 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.64■■□□□ 1.37
RETREG2Q8NC44 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.64■■□□□ 1.37
RETREG2Q8NC44 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RETREG2Q8NC44 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.64■■□□□ 1.37
RETREG2Q8NC44 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RETREG2Q8NC44 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.64■■□□□ 1.37
RETREG2Q8NC44 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.64■■□□□ 1.37
RETREG2Q8NC44 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 MIR4758-201ENST00000577688 71 ntBASIC23.63■■□□□ 1.37
RETREG2Q8NC44 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETREG2Q8NC44 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 AC244015.2-201ENST00000616358 1861 ntBASIC23.62■■□□□ 1.37
RETREG2Q8NC44 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 AC013268.1-206ENST00000638368 961 ntBASIC23.62■■□□□ 1.37
RETREG2Q8NC44 AC112229.1-201ENST00000639295 961 ntBASIC23.62■■□□□ 1.37
RETREG2Q8NC44 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.62■■□□□ 1.37
RETREG2Q8NC44 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RETREG2Q8NC44 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms