Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
LRTM2Q8N967 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.33
LRTM2Q8N967 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.08■□□□□ 0.32
LRTM2Q8N967 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.08■□□□□ 0.32
LRTM2Q8N967 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM2Q8N967 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.08■□□□□ 0.32
LRTM2Q8N967 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LRTM2Q8N967 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM2Q8N967 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM2Q8N967 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM2Q8N967 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM2Q8N967 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.08■□□□□ 0.32
LRTM2Q8N967 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LRTM2Q8N967 AL512408.1-201ENST00000569378 2000 ntBASIC17.08■□□□□ 0.32
LRTM2Q8N967 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.08■□□□□ 0.32
LRTM2Q8N967 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.07■□□□□ 0.32
LRTM2Q8N967 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRTM2Q8N967 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM2Q8N967 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM2Q8N967 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM2Q8N967 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM2Q8N967 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.07■□□□□ 0.32
LRTM2Q8N967 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM2Q8N967 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM2Q8N967 AC099791.2-201ENST00000605725 427 ntBASIC17.07■□□□□ 0.32
LRTM2Q8N967 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LRTM2Q8N967 MIR6724-1-201ENST00000616420 92 ntBASIC17.07■□□□□ 0.32
LRTM2Q8N967 MIR6724-2-201ENST00000616483 92 ntBASIC17.07■□□□□ 0.32
LRTM2Q8N967 MIR6724-4-201ENST00000617390 92 ntBASIC17.07■□□□□ 0.32
LRTM2Q8N967 MIR6724-3-201ENST00000622482 92 ntBASIC17.07■□□□□ 0.32
LRTM2Q8N967 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM2Q8N967 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRTM2Q8N967 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM2Q8N967 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM2Q8N967 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM2Q8N967 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM2Q8N967 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM2Q8N967 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.06■□□□□ 0.32
LRTM2Q8N967 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.06■□□□□ 0.32
LRTM2Q8N967 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.06■□□□□ 0.32
LRTM2Q8N967 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.06■□□□□ 0.32
LRTM2Q8N967 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.06■□□□□ 0.32
LRTM2Q8N967 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.06■□□□□ 0.32
LRTM2Q8N967 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.06■□□□□ 0.32
LRTM2Q8N967 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.06■□□□□ 0.32
LRTM2Q8N967 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRTM2Q8N967 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.06■□□□□ 0.32
LRTM2Q8N967 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 PCDHAC2-203ENST00000615316 3011 ntBASIC17.06■□□□□ 0.32
LRTM2Q8N967 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
LRTM2Q8N967 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRTM2Q8N967 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM2Q8N967 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.05■□□□□ 0.32
LRTM2Q8N967 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.05■□□□□ 0.32
LRTM2Q8N967 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.05■□□□□ 0.32
LRTM2Q8N967 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.05■□□□□ 0.32
LRTM2Q8N967 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LRTM2Q8N967 AC099778.1-201ENST00000568593 1911 ntBASIC17.05■□□□□ 0.32
LRTM2Q8N967 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM2Q8N967 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM2Q8N967 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRTM2Q8N967 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM2Q8N967 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM2Q8N967 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM2Q8N967 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRTM2Q8N967 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRTM2Q8N967 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM2Q8N967 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM2Q8N967 SMG8-203ENST00000578922 2178 ntBASIC17.04■□□□□ 0.32
LRTM2Q8N967 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.04■□□□□ 0.32
LRTM2Q8N967 AC010525.1-201ENST00000585559 441 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms