Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 UNC93B3-201ENST00000308076 687 ntBASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 AC126544.1-201ENST00000580842 1059 ntBASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.58■□□□□ 0.89
CCNYL1Q8N7R7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.58■□□□□ 0.88
CCNYL1Q8N7R7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.58■□□□□ 0.88
CCNYL1Q8N7R7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCNYL1Q8N7R7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.58■□□□□ 0.88
CCNYL1Q8N7R7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.58■□□□□ 0.88
CCNYL1Q8N7R7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCNYL1Q8N7R7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.58■□□□□ 0.88
CCNYL1Q8N7R7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 AC133561.4-201ENST00000566112 224 ntBASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 AC233992.3-201ENST00000607491 485 ntBASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 AC006128.1-201ENST00000624704 1661 ntBASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL1Q8N7R7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 PLK5-205ENST00000642079 1969 ntBASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL1Q8N7R7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL1Q8N7R7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNYL1Q8N7R7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNYL1Q8N7R7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.54■□□□□ 0.88
CCNYL1Q8N7R7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNYL1Q8N7R7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.54■□□□□ 0.88
CCNYL1Q8N7R7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNYL1Q8N7R7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCNYL1Q8N7R7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNYL1Q8N7R7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms