Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.15■□□□□ 0.98
SRRM1Q8IYB3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
SRRM1Q8IYB3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM1Q8IYB3 AP004607.7-201ENST00000527152 1677 ntBASIC21.15■□□□□ 0.98
SRRM1Q8IYB3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM1Q8IYB3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRRM1Q8IYB3 RNF165-205ENST00000588679 2904 ntBASIC21.15■□□□□ 0.98
SRRM1Q8IYB3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SRRM1Q8IYB3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
SRRM1Q8IYB3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRRM1Q8IYB3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.14■□□□□ 0.98
SRRM1Q8IYB3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRRM1Q8IYB3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRRM1Q8IYB3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SRRM1Q8IYB3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 AC096631.2-201ENST00000436136 790 ntBASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 AC099791.2-201ENST00000605725 427 ntBASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRRM1Q8IYB3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.13■□□□□ 0.97
SRRM1Q8IYB3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 MIR6724-1-201ENST00000616420 92 ntBASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 MIR6724-2-201ENST00000616483 92 ntBASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 MIR6724-4-201ENST00000617390 92 ntBASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 MIR6724-3-201ENST00000622482 92 ntBASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.12■□□□□ 0.97
SRRM1Q8IYB3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 ZNRF2P3-201ENST00000424200 374 ntBASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 MIR3181-201ENST00000578512 73 ntBASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.11■□□□□ 0.97
SRRM1Q8IYB3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
SRRM1Q8IYB3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.1■□□□□ 0.97
SRRM1Q8IYB3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM1Q8IYB3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM1Q8IYB3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM1Q8IYB3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM1Q8IYB3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM1Q8IYB3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRRM1Q8IYB3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms