Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRIM42Q8IWZ5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM42Q8IWZ5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM42Q8IWZ5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM42Q8IWZ5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM42Q8IWZ5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM42Q8IWZ5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM42Q8IWZ5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM42Q8IWZ5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM42Q8IWZ5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM42Q8IWZ5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
TRIM42Q8IWZ5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM42Q8IWZ5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 PLK5-205ENST00000642079 1969 ntBASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM42Q8IWZ5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
TRIM42Q8IWZ5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.77■□□□□ 0.91
TRIM42Q8IWZ5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.77■□□□□ 0.91
TRIM42Q8IWZ5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM42Q8IWZ5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.77■□□□□ 0.91
TRIM42Q8IWZ5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.77■□□□□ 0.91
TRIM42Q8IWZ5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM42Q8IWZ5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM42Q8IWZ5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 AL356740.2-201ENST00000601559 647 ntBASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRIM42Q8IWZ5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM42Q8IWZ5 AC007952.6-201ENST00000573168 2673 ntBASIC20.74■□□□□ 0.91
TRIM42Q8IWZ5 AC003957.1-201ENST00000625108 2673 ntBASIC20.74■□□□□ 0.91
TRIM42Q8IWZ5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM42Q8IWZ5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
TRIM42Q8IWZ5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM42Q8IWZ5 MIR3621-201ENST00000580529 85 ntBASIC20.74■□□□□ 0.91
TRIM42Q8IWZ5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM42Q8IWZ5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TRIM42Q8IWZ5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM42Q8IWZ5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM42Q8IWZ5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM42Q8IWZ5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 AC008406.3-201ENST00000620001 1374 ntBASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 AC099791.2-201ENST00000605725 427 ntBASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms