Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.32■□□□□ 0.68
VRK2Q86Y07 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VRK2Q86Y07 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VRK2Q86Y07 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VRK2Q86Y07 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VRK2Q86Y07 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VRK2Q86Y07 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.32■□□□□ 0.68
VRK2Q86Y07 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.32■□□□□ 0.68
VRK2Q86Y07 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.32■□□□□ 0.68
VRK2Q86Y07 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
VRK2Q86Y07 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.32■□□□□ 0.68
VRK2Q86Y07 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.32■□□□□ 0.68
VRK2Q86Y07 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
VRK2Q86Y07 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.32■□□□□ 0.68
VRK2Q86Y07 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VRK2Q86Y07 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.32■□□□□ 0.68
VRK2Q86Y07 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VRK2Q86Y07 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
VRK2Q86Y07 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VRK2Q86Y07 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VRK2Q86Y07 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VRK2Q86Y07 IRS3P-201ENST00000223076 1006 ntBASIC19.31■□□□□ 0.68
VRK2Q86Y07 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
VRK2Q86Y07 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VRK2Q86Y07 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VRK2Q86Y07 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VRK2Q86Y07 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.31■□□□□ 0.68
VRK2Q86Y07 EEF1DP3-203ENST00000566025 782 ntBASIC19.31■□□□□ 0.68
VRK2Q86Y07 PLK5-205ENST00000642079 1969 ntBASIC19.31■□□□□ 0.68
VRK2Q86Y07 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
VRK2Q86Y07 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VRK2Q86Y07 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
VRK2Q86Y07 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
VRK2Q86Y07 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VRK2Q86Y07 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VRK2Q86Y07 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VRK2Q86Y07 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VRK2Q86Y07 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.3■□□□□ 0.68
VRK2Q86Y07 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VRK2Q86Y07 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.3■□□□□ 0.68
VRK2Q86Y07 AC053503.5-201ENST00000601508 636 ntBASIC19.3■□□□□ 0.68
VRK2Q86Y07 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VRK2Q86Y07 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VRK2Q86Y07 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VRK2Q86Y07 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VRK2Q86Y07 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
VRK2Q86Y07 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.29■□□□□ 0.68
VRK2Q86Y07 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 MIR638-201ENST00000385237 100 ntBASIC19.29■□□□□ 0.68
VRK2Q86Y07 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.29■□□□□ 0.68
VRK2Q86Y07 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.29■□□□□ 0.68
VRK2Q86Y07 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
VRK2Q86Y07 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.29■□□□□ 0.68
VRK2Q86Y07 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.29■□□□□ 0.68
VRK2Q86Y07 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK2Q86Y07 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VRK2Q86Y07 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VRK2Q86Y07 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VRK2Q86Y07 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VRK2Q86Y07 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VRK2Q86Y07 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VRK2Q86Y07 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
VRK2Q86Y07 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VRK2Q86Y07 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VRK2Q86Y07 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VRK2Q86Y07 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VRK2Q86Y07 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
VRK2Q86Y07 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.28■□□□□ 0.68
VRK2Q86Y07 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VRK2Q86Y07 AC061975.6-201ENST00000579045 1553 ntBASIC19.27■□□□□ 0.68
VRK2Q86Y07 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK2Q86Y07 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
VRK2Q86Y07 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.27■□□□□ 0.68
VRK2Q86Y07 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK2Q86Y07 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
VRK2Q86Y07 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VRK2Q86Y07 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VRK2Q86Y07 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.27■□□□□ 0.68
VRK2Q86Y07 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK2Q86Y07 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VRK2Q86Y07 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
VRK2Q86Y07 AC006128.1-201ENST00000624704 1661 ntBASIC19.27■□□□□ 0.67
VRK2Q86Y07 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VRK2Q86Y07 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.26■□□□□ 0.67
VRK2Q86Y07 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.26■□□□□ 0.67
VRK2Q86Y07 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VRK2Q86Y07 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VRK2Q86Y07 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VRK2Q86Y07 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms