Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL162412.1-201ENST00000567129 965 ntBASIC23.36■■□□□ 1.33
TRIM50Q86XT4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM50Q86XT4 AC092118.2-201ENST00000613495 667 ntBASIC23.36■■□□□ 1.33
TRIM50Q86XT4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM50Q86XT4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
TRIM50Q86XT4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM50Q86XT4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM50Q86XT4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM50Q86XT4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM50Q86XT4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM50Q86XT4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM50Q86XT4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 AC091799.1-201ENST00000422823 811 ntBASIC23.35■■□□□ 1.33
TRIM50Q86XT4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.35■■□□□ 1.33
TRIM50Q86XT4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TRIM50Q86XT4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM50Q86XT4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM50Q86XT4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM50Q86XT4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIM50Q86XT4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM50Q86XT4 AC083880.1-201ENST00000608266 535 ntBASIC23.34■■□□□ 1.33
TRIM50Q86XT4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.34■■□□□ 1.33
TRIM50Q86XT4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM50Q86XT4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM50Q86XT4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM50Q86XT4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM50Q86XT4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 RNA5SP413-201ENST00000516373 109 ntBASIC23.33■■□□□ 1.33
TRIM50Q86XT4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM50Q86XT4 TMEM191A-211ENST00000637163 1067 ntBASIC23.33■■□□□ 1.33
TRIM50Q86XT4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM50Q86XT4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM50Q86XT4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM50Q86XT4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM50Q86XT4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TRIM50Q86XT4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.32■■□□□ 1.32
TRIM50Q86XT4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.32■■□□□ 1.32
TRIM50Q86XT4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM50Q86XT4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM50Q86XT4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.32■■□□□ 1.32
TRIM50Q86XT4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TRIM50Q86XT4 AC245052.3-201ENST00000450182 901 ntBASIC23.32■■□□□ 1.32
TRIM50Q86XT4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.32■■□□□ 1.32
TRIM50Q86XT4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
TRIM50Q86XT4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM50Q86XT4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM50Q86XT4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM50Q86XT4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM50Q86XT4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
TRIM50Q86XT4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms