Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF546Q86UE3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ZNF546Q86UE3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 KRT18P24-201ENST00000344739 1156 ntBASIC17.34■□□□□ 0.37
ZNF546Q86UE3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF546Q86UE3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF546Q86UE3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF546Q86UE3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF546Q86UE3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.33■□□□□ 0.37
ZNF546Q86UE3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNF546Q86UE3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNF546Q86UE3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNF546Q86UE3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF546Q86UE3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ZNF546Q86UE3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF546Q86UE3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ZNF546Q86UE3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF546Q86UE3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF546Q86UE3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF546Q86UE3 AC027702.1-201ENST00000563810 1770 ntBASIC17.33■□□□□ 0.36
ZNF546Q86UE3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ZNF546Q86UE3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF546Q86UE3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 AC020907.5-201ENST00000624372 1936 ntBASIC17.32■□□□□ 0.36
ZNF546Q86UE3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 DUX4L4-201ENST00000566884 1269 ntBASIC17.32■□□□□ 0.36
ZNF546Q86UE3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF546Q86UE3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF546Q86UE3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms