Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.23■□□□□ 0.99
CROCCP2Q86T23 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 OR2I1P-207ENST00000453522 948 ntBASIC21.22■□□□□ 0.99
CROCCP2Q86T23 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CROCCP2Q86T23 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 RNF165-205ENST00000588679 2904 ntBASIC21.21■□□□□ 0.99
CROCCP2Q86T23 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 AL117332.1-201ENST00000622628 974 ntBASIC21.21■□□□□ 0.99
CROCCP2Q86T23 AFG3L1P-217ENST00000557444 2447 ntBASIC21.21■□□□□ 0.99
CROCCP2Q86T23 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.21■□□□□ 0.99
CROCCP2Q86T23 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.2■□□□□ 0.99
CROCCP2Q86T23 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 pRNA.6-201ENST00000610482 90 ntBASIC21.2■□□□□ 0.98
CROCCP2Q86T23 pRNA.5-201ENST00000612139 90 ntBASIC21.2■□□□□ 0.98
CROCCP2Q86T23 pRNA.11-201ENST00000618423 90 ntBASIC21.2■□□□□ 0.98
CROCCP2Q86T23 pRNA.13-201ENST00000619112 90 ntBASIC21.2■□□□□ 0.98
CROCCP2Q86T23 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 AL162377.1-201ENST00000618844 1793 ntBASIC21.2■□□□□ 0.98
CROCCP2Q86T23 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CROCCP2Q86T23 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP2Q86T23 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP2Q86T23 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CROCCP2Q86T23 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP2Q86T23 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP2Q86T23 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP2Q86T23 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP2Q86T23 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP2Q86T23 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP2Q86T23 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.19■□□□□ 0.98
CROCCP2Q86T23 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
CROCCP2Q86T23 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP2Q86T23 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CROCCP2Q86T23 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.18■□□□□ 0.98
CROCCP2Q86T23 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.18■□□□□ 0.98
CROCCP2Q86T23 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.18■□□□□ 0.98
CROCCP2Q86T23 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.18■□□□□ 0.98
CROCCP2Q86T23 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.18■□□□□ 0.98
CROCCP2Q86T23 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.18■□□□□ 0.98
CROCCP2Q86T23 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CROCCP2Q86T23 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CROCCP2Q86T23 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CROCCP2Q86T23 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CROCCP2Q86T23 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CROCCP2Q86T23 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP2Q86T23 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms