Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00336Q6ZUF6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00336Q6ZUF6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00336Q6ZUF6 AC010331.1-201ENST00000611423 582 ntBASIC14.03□□□□□ -0.16
LINC00336Q6ZUF6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00336Q6ZUF6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00336Q6ZUF6 HLA-B-256ENST00000639848 1089 ntBASIC14.03□□□□□ -0.16
LINC00336Q6ZUF6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00336Q6ZUF6 OR7E47P-201ENST00000546390 1422 ntBASIC14.03□□□□□ -0.16
LINC00336Q6ZUF6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00336Q6ZUF6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00336Q6ZUF6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LINC00336Q6ZUF6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00336Q6ZUF6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00336Q6ZUF6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00336Q6ZUF6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00336Q6ZUF6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 C1QBPP2-201ENST00000528754 825 ntBASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00336Q6ZUF6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 RBM17P2-201ENST00000616397 1405 ntBASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 AC211429.1-201ENST00000415277 523 ntBASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 CYP2T3P-201ENST00000601990 817 ntBASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00336Q6ZUF6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00336Q6ZUF6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 AP006587.3-201ENST00000525742 1516 ntBASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LINC00336Q6ZUF6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms