Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COLCA1Q6ZS62 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
COLCA1Q6ZS62 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
COLCA1Q6ZS62 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.02■□□□□ 0.48
COLCA1Q6ZS62 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COLCA1Q6ZS62 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COLCA1Q6ZS62 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COLCA1Q6ZS62 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COLCA1Q6ZS62 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.02■□□□□ 0.48
COLCA1Q6ZS62 SLC7A5P1-201ENST00000568957 537 ntBASIC18.02■□□□□ 0.48
COLCA1Q6ZS62 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
COLCA1Q6ZS62 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COLCA1Q6ZS62 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 SLC7A5P2-201ENST00000553010 536 ntBASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 NTF6G-201ENST00000591094 616 ntBASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COLCA1Q6ZS62 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COLCA1Q6ZS62 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
COLCA1Q6ZS62 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COLCA1Q6ZS62 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18■□□□□ 0.47
COLCA1Q6ZS62 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COLCA1Q6ZS62 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COLCA1Q6ZS62 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18■□□□□ 0.47
COLCA1Q6ZS62 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COLCA1Q6ZS62 RARRES2P6-201ENST00000567333 442 ntBASIC18■□□□□ 0.47
COLCA1Q6ZS62 RARRES2P11-201ENST00000635158 484 ntBASIC18■□□□□ 0.47
COLCA1Q6ZS62 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COLCA1Q6ZS62 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
COLCA1Q6ZS62 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLCA1Q6ZS62 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COLCA1Q6ZS62 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COLCA1Q6ZS62 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COLCA1Q6ZS62 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COLCA1Q6ZS62 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COLCA1Q6ZS62 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.97■□□□□ 0.47
COLCA1Q6ZS62 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.97■□□□□ 0.47
COLCA1Q6ZS62 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.97■□□□□ 0.47
COLCA1Q6ZS62 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COLCA1Q6ZS62 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COLCA1Q6ZS62 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.97■□□□□ 0.47
COLCA1Q6ZS62 PLK5-205ENST00000642079 1969 ntBASIC17.97■□□□□ 0.47
COLCA1Q6ZS62 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.97■□□□□ 0.47
COLCA1Q6ZS62 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLCA1Q6ZS62 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms