Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 HLA-L-209ENST00000420110 1011 ntBASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
GDPD4Q6W3E5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.02■□□□□ 0.96
GDPD4Q6W3E5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.02■□□□□ 0.96
GDPD4Q6W3E5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GDPD4Q6W3E5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GDPD4Q6W3E5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GDPD4Q6W3E5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.02■□□□□ 0.96
GDPD4Q6W3E5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
GDPD4Q6W3E5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GDPD4Q6W3E5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
GDPD4Q6W3E5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.02■□□□□ 0.96
GDPD4Q6W3E5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.02■□□□□ 0.96
GDPD4Q6W3E5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.02■□□□□ 0.96
GDPD4Q6W3E5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.02■□□□□ 0.95
GDPD4Q6W3E5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.02■□□□□ 0.95
GDPD4Q6W3E5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
GDPD4Q6W3E5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
GDPD4Q6W3E5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.02■□□□□ 0.95
GDPD4Q6W3E5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 GPX1P1-201ENST00000388829 606 ntBASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 AL591742.1-201ENST00000604433 565 ntBASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 AL121832.2-201ENST00000610979 668 ntBASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDPD4Q6W3E5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21■□□□□ 0.95
GDPD4Q6W3E5 CYP2T1P-201ENST00000432607 1285 ntBASIC21■□□□□ 0.95
GDPD4Q6W3E5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
GDPD4Q6W3E5 AC083906.2-201ENST00000511578 360 ntBASIC21■□□□□ 0.95
GDPD4Q6W3E5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21■□□□□ 0.95
GDPD4Q6W3E5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21■□□□□ 0.95
GDPD4Q6W3E5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21■□□□□ 0.95
GDPD4Q6W3E5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDPD4Q6W3E5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDPD4Q6W3E5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21■□□□□ 0.95
GDPD4Q6W3E5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
GDPD4Q6W3E5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21■□□□□ 0.95
GDPD4Q6W3E5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 AC133552.2-202ENST00000575694 574 ntBASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 AL109923.1-201ENST00000618799 583 ntBASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.99■□□□□ 0.95
GDPD4Q6W3E5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 AC091799.1-201ENST00000422823 811 ntBASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 AL162412.1-201ENST00000567129 965 ntBASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 AC104771.1-201ENST00000603335 964 ntBASIC20.98■□□□□ 0.95
GDPD4Q6W3E5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms